Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMa1754 and SMa1755 are separated by 98 nucleotidesSMa1755 and SMa1757 are separated by 205 nucleotidesSMa1757 and SMa1759 are separated by 45 nucleotidesSMa1759 and SMa1760 overlap by 27 nucleotides SMa1754: SMa1754 - ABC transporter ATP-binding protein, at 996,635 to 997,714 SMa1754 SMa1755: SMa1755 - ABC transporter substrate-binding protein, at 997,813 to 998,865 SMa1755 SMa1757: SMa1757 - Short chain, at 999,071 to 999,841 SMa1757 SMa1759: SMa1759 - GntR family transcriptional regulator, at 999,887 to 1,000,567 SMa1759 SMa1760: SMa1760 - phosphotransferase, at 1,000,541 to 1,001,788 SMa1760
Group Condition SMa1754 SMa1755 SMa1757 SMa1759 SMa1760
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.4 -0.1 +0.1 -1.0 -0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.9 -0.1 -0.5 -0.4 -0.4
nitrogen source L-Histidine (N) -0.6 -0.4 -0.9 +0.0 -0.3
carbon source methyl 3-keto-a-D-glucopyranoside (C) -0.6 -0.0 -0.5 -0.6 +0.0
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 +0.0 -1.2 -0.3 +0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.1 +0.2 -2.2 +0.0 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.1 -0.3 -0.8 -0.2 -0.0
carbon source methyl 3-keto-a-D-glucopyranoside (C) -0.1 -0.2 -0.4 -0.5 -0.2
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) -0.1 +0.0 -0.7 -0.5 +0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -0.2 -0.5 +0.2 +0.0
carbon source Lactitol (C) +0.2 -0.2 -0.5 -0.2 -0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 -0.3 -0.8 -0.1 +0.1
nitrogen source L-Asparagine (N) -1.2 +0.1 +0.5 -0.2 +0.1
stress 3-octanone 0.456 mM -0.2 -0.1 +0.7 -0.7 -0.1
stress Nickel (II) chloride 0.5 mM -0.5 +0.1 +0.3 +0.4 -0.5
stress Polymyxin B sulfate 0.00005 mg/ml +0.9 -0.2 -0.2 -0.0 -0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +0.3 -0.6 -0.3 +0.1
nitrogen source D-Glucosamine Hydrochloride (N) +0.2 -0.3 +0.7 -0.1 -0.1
stress Cisplatin 0.001 mg/ml +0.5 -0.1 +0.5 -0.2 +0.0
carbon source L-Lysine (C) -0.4 -0.1 +0.0 +0.9 +0.4
carbon source L-Lysine (C) -0.1 -0.1 +0.1 +0.7 +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 +0.1 +0.8 -0.0 +0.2
r2a-hepes control R2A-HEPES control for volatile experiments +0.3 -0.1 +0.6 +0.2 +0.2
r2a-hepes control R2A-HEPES control for volatile experiments +0.2 -0.1 +0.7 +0.3 +0.2
carbon source 5-Aminovaleric (C) +0.2 +0.2 +0.2 +0.3 +0.3
r2a control R2A control for volatile experiments +0.5 +0.0 +0.7 +0.2 +0.1
r2a control R2A control for volatile experiments +0.2 +0.3 +0.8 -0.1 +0.2
r2a-hepes control R2A-HEPES control for volatile experiments -0.1 +0.1 +0.9 +0.3 +0.3
stress nitrate 40 mM +0.6 +0.4 +0.1 +0.5 +0.1
nitrogen source L-Arginine (N) -0.3 +0.3 +1.5 -0.2 +0.4
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