Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMa1736 and SMa1737 are separated by 204 nucleotidesSMa1737 and SMa1740 are separated by 467 nucleotidesSMa1740 and SMa1741 overlap by 4 nucleotidesSMa1741 and SMa1742 overlap by 1 nucleotides SMa1736: SMa1736 - LysR family transcriptional regulator, at 981,384 to 982,265 SMa1736 SMa1737: SMa1737 - hypothetical protein, at 982,470 to 983,528 SMa1737 SMa1740: SMa1740 - Siderophore-interacting protein, at 983,996 to 985,066 SMa1740 SMa1741: SMa1741 - ABC transporter ATP-binding protein, at 985,063 to 985,905 SMa1741 SMa1742: SMa1742 - Fe3+-siderophore ABC transporter permease, at 985,905 to 986,942 SMa1742
Group Condition SMa1736 SMa1737 SMa1740 SMa1741 SMa1742
stress 3-octanone 0.456 mM -0.7 -0.5 -0.0 N.D. -0.4
stress 6-Pentyl-2H-pyran-2-one 0.4557668333 mM -0.5 -0.1 -0.1 N.D. -0.4
stress 6-Pentyl-2H-pyran-2-one 0.385649 mM -0.6 -0.2 -0.2 N.D. +0.1
nitrogen source L-Asparagine (N) +0.2 +0.1 -0.3 N.D. -0.6
stress copper (II) chloride 1 mM -0.0 -0.3 +0.3 N.D. -0.6
nitrogen source L-Arginine (N) -0.7 -0.1 -0.0 N.D. +0.3
pH LB, pH7 +0.2 -0.0 -0.0 N.D. -0.6
stress 3-octanone 5.310333333 mM -0.5 -0.2 +0.2 N.D. +0.1
stress 6-Pentyl-2H-pyran-2-one 0.385649 mM -0.5 +0.1 -0.1 N.D. +0.2
stress Nickel (II) chloride 1 mM -0.2 +0.1 +0.2 N.D. -0.3
r2a control R2A control -0.4 -0.1 -0.2 N.D. +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 +0.4 +0.1 N.D. -0.3
nitrogen source L-Serine (N) -0.2 +0.2 +0.2 N.D. -0.3
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) +0.2 +0.3 +0.2 N.D. -0.7
nutrient Min media with glucose -0.2 +0.5 -0.1 N.D. -0.2
stress 6-Pentyl-2H-pyran-2-one 0.4177863333 mM -0.5 +0.1 +0.3 N.D. +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +0.1 +0.1 N.D. -0.4
stress D-Cycloserine 0.05 mg/ml +0.4 +0.0 +0.2 N.D. -0.3
stress Polymyxin B sulfate 0.00005 mg/ml -0.2 -0.4 +0.5 N.D. +0.6
lb LB +0.4 +0.1 -0.2 N.D. +0.3
stress Chlorite 0.1 mM -0.2 -0.2 +0.2 N.D. +0.7
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) +0.5 +0.1 +0.2 N.D. -0.2
pH LB, pH6 -0.1 +0.1 +0.2 N.D. +0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.2 +0.2 +0.2 N.D. +0.4
carbon source D-Glucose (C) +0.0 +0.1 +0.4 N.D. +0.3
carbon source Sucrose (C) +0.1 +0.2 +0.3 N.D. +0.3
carbon source palatinose (C) +0.1 +0.3 +0.2 N.D. +0.3
nitrogen source L-Leucine (N) +0.1 +0.6 +0.1 N.D. +0.2
nitrogen source NAG (N) +0.5 +0.2 +0.2 N.D. -0.0
stress Cisplatin 0.001 mg/ml +0.1 +0.7 +0.2 N.D. +0.0
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