Fitness for 5 genes in Sinorhizobium meliloti 1021

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 243 experiments or choose conditions or try the comparative fitness browser

500 ntSMa1729 and SMa1731 are separated by 193 nucleotidesSMa1731 and SMa1732 are separated by 19 nucleotidesSMa1732 and SMa1734 are separated by 11 nucleotidesSMa1734 and SMa1735 are separated by 439 nucleotides SMa1729: SMa1729 - ABC transporter substrate-binding protein, at 975,705 to 976,706 SMa1729 SMa1731: SMa1731 - betaine aldehyde dehydrogenase, at 976,900 to 978,369 SMa1731 SMa1732: SMa1732 - hypothetical protein, at 978,389 to 978,742 SMa1732 SMa1734: SMa1734 - hypothetical protein, at 978,754 to 979,836 SMa1734 SMa1735: SMa1735 - oxidoreductase, at 980,276 to 981,340 SMa1735
Group Condition SMa1729 SMa1731 SMa1732 SMa1734 SMa1735
dmso control DMSO control -0.5 -0.1 N.D. -0.3 -0.2
r2a control R2A control for volatile experiments -0.3 -0.2 N.D. +0.1 -0.2
r2a-hepes control R2A-HEPES control for volatile experiments -0.3 -0.3 N.D. +0.1 -0.1
r2a control R2A control for volatile experiments -0.4 +0.1 N.D. -0.2 -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.1 -0.5 N.D. +0.1 -0.1
pH LB, pH6 -0.2 -0.1 N.D. -0.2 +0.0
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -0.3 N.D. +0.1 -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.2 +0.1 N.D. -0.5 +0.0
r2a-hepes control R2A-HEPES control for volatile experiments -0.4 -0.1 N.D. +0.0 -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.2 -0.2 N.D. +0.1 -0.1
nitrogen source L-Arginine (N) -0.1 -0.0 N.D. -0.4 +0.1
stress Nickel (II) chloride 1 mM +0.0 -0.5 N.D. -0.0 +0.1
stress perchlorate 10 mM +0.2 -0.2 N.D. -0.3 +0.0
r2a-hepes control R2A-HEPES control for volatile experiments -0.3 +0.1 N.D. -0.2 +0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 +0.2 N.D. -0.1 -0.1
stress 6-Pentyl-2H-pyran-2-one 0.4177863333 mM -0.2 +0.1 N.D. -0.2 +0.1
nitrogen source L-Serine (N) +0.1 -0.2 N.D. +0.2 -0.1
stress nitrite 20 mM +0.2 -0.1 N.D. +0.1 -0.2
stress nitrate 40 mM +0.1 +0.2 N.D. -0.2 -0.1
carbon source D-Glucose (C) +0.3 -0.0 N.D. -0.2 +0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.2 +0.0 N.D. +0.3 +0.1
lb no stress control LB no stress control -0.2 +0.4 N.D. -0.1 +0.1
nitrogen source L-Asparagine (N) +0.5 -0.3 N.D. +0.0 +0.1
stress Chloride 200 mM +0.3 +0.2 N.D. +0.1 -0.1
carbon source methyl-beta-D-xylopyranoside (C) +0.3 +0.1 N.D. +0.1 +0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.2 +0.3 N.D. +0.1 +0.0
nitrogen source Cytosine (N) +0.5 +0.2 N.D. -0.2 +0.1
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI +0.2 +0.1 N.D. +0.2 +0.2
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) +0.2 +0.2 N.D. +0.5 +0.4
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) +0.1 +0.6 N.D. +0.4 +0.4
remove
SMa1729
plot		 remove
SMa1731
plot		 remove
SMa1732		 remove
SMa1734
plot		 remove
SMa1735
plot