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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMa1650 and SMa1651 are separated by 13 nucleotides
SMa1651 and SMa1652 are separated by 265 nucleotides
SMa1652 and SMa1653 are separated by 2 nucleotides
SMa1653 and SMa1654 are separated by 162 nucleotides
SMa1650: SMa1650 - ABC transporter permease, at 920,273 to 921,208
SMa1650
SMa1651: SMa1651 - ABC transporter substrate-binding protein, at 921,222 to 922,799
SMa1651
SMa1652: SMa1652 - hydantoin racemase, at 923,065 to 923,850
SMa1652
SMa1653: SMa1653 - hypothetical protein, at 923,853 to 924,578
SMa1653
SMa1654: SMa1654 - GntR family transcriptional regulator, at 924,741 to 925,439
SMa1654
Group
Condition
SMa1650
SMa1651
SMa1652
SMa1653
SMa1654
nitrogen source
L-Asparagine (N)
-0.3
-0.4
-0.4
-0.1
-1.1
carbon source
L-Histidine (C)
-0.2
+0.2
-0.1
-0.0
-1.6
nitrogen source
Cytosine (N)
-0.5
+0.1
-0.1
-0.9
-0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.4
-0.5
-0.0
-0.3
-1.1
nitrogen source
Gly-DL-Asp (N)
-0.0
-0.2
-0.3
-0.5
-0.4
nitrogen source
Gelatin (N)
-0.8
+0.1
-0.2
-0.1
-0.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.1
-0.5
+0.2
-1.0
+0.0
nitrogen source
D-Glucosamine Hydrochloride (N)
-0.4
+0.1
-0.6
-0.2
-0.2
nitrogen source
L-Histidine (N)
-0.7
+0.1
+0.0
-0.1
-0.5
dmso control
DMSO control
-0.1
-0.2
-0.1
-0.1
-0.7
r2a control
R2A control for volatile experiments
+0.1
+0.0
-0.1
-0.3
-0.8
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.0
+0.1
+0.0
-0.4
-0.7
carbon source
L-Alanine (C)
-0.7
+0.2
-0.0
-0.2
-0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.0
-0.3
-0.7
-0.0
+0.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
+0.1
-0.2
-0.6
+0.2
-0.1
nitrogen source
NAG (N)
-0.2
+0.3
-0.1
-0.3
-0.1
stress
Paraquat dichloride 0.2 mg/ml
+0.2
-0.0
-0.4
+0.2
-0.4
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.3
+0.1
-0.1
-0.7
+0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.3
-0.2
-0.1
-0.6
+0.2
stress
nitrate 40 mM
-0.7
-0.1
+0.0
+0.3
+0.1
stress
Thallium(I) acetate 0.0025 mg/ml
-0.2
-0.1
+0.2
-0.6
+0.6
nitrogen source
L-Arginine (N)
-0.4
-0.2
+0.2
-0.1
+0.4
r2a control
R2A control for volatile experiments
+0.1
-0.0
-0.1
-0.5
+0.6
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.5
-0.3
+0.1
-0.5
+0.2
stress
Polymyxin B sulfate 0.00005 mg/ml
+0.6
-0.3
-0.6
-0.2
+0.6
stress
Cisplatin 0.001 mg/ml
-0.4
-0.1
+0.2
-0.0
+0.5
stress
1-octen-3-ol 0.5427293333 mM
+0.3
+0.3
+0.2
-0.2
-0.2
stress
Paraquat dichloride 0.3 mg/ml
-0.5
+0.3
+0.1
-0.2
+0.9
stress
Nickel (II) chloride 1 mM
+0.3
+0.2
-0.1
+0.5
-0.2
stress
Chlorite 0.1 mM
+0.3
-0.1
+0.2
-0.2
+0.8
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