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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMa5010 and SMa1646 are separated by 363 nucleotides
SMa1646 and SMa1647 overlap by 4 nucleotides
SMa1647 and SMa1649 overlap by 11 nucleotides
SMa1649 and SMa1650 overlap by 10 nucleotides
SMa5010: SMa5010 - hypothetical protein, at 916,665 to 917,003
SMa5010
SMa1646: SMa1646 - ABC transporter ATP-binding protein, at 917,367 to 918,389
SMa1646
SMa1647: SMa1647 - ABC transporter ATP-binding protein, at 918,386 to 919,381
SMa1647
SMa1649: SMa1649 - ABC transporter permease, at 919,371 to 920,282
SMa1649
SMa1650: SMa1650 - ABC transporter permease, at 920,273 to 921,208
SMa1650
Group
Condition
SMa5010
SMa1646
SMa1647
SMa1649
SMa1650
r2a control
R2A control for volatile experiments
-3.6
-0.2
-0.2
-0.1
-0.2
stress
1-octen-3-ol 0.5427293333 mM
-2.7
+0.0
+0.1
+0.2
-0.0
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-2.7
-0.2
-0.1
+0.4
+0.5
carbon source
methyl 3-keto-a-D-glucopyranoside (C)
-1.8
+0.0
+0.0
-0.1
-0.1
stress
6-Pentyl-2H-pyran-2-one 0.4557668333 mM
-1.2
-0.2
-0.3
+0.1
-0.4
carbon source
D-Glucose (C)
-1.2
-0.3
+0.1
-0.1
-0.1
stress
Paraquat dichloride 0.2 mg/ml
-1.6
-0.2
-0.0
+0.1
+0.2
r2a-hepes control
R2A-HEPES control for volatile experiments
-1.4
-0.0
-0.4
-0.0
+0.4
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-2.7
+0.3
+0.5
-0.1
+0.4
stress
nitrate 40 mM
-1.0
+0.1
+0.2
-0.0
-0.7
carbon source
Lactitol (C)
-1.8
-0.0
+0.1
+0.4
-0.1
nitrogen source
L-Glutamine (N)
-1.1
+0.0
+0.2
-0.0
-0.5
carbon source
Xylobiose (C)
-1.4
-0.1
+0.1
-0.2
+0.4
dmso control
DMSO control
-1.7
-0.0
+0.2
+0.1
+0.3
pH
LB, pH7
-1.0
-0.1
+0.3
+0.1
-0.3
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-1.2
+0.1
-0.0
-0.2
+0.3
dmso control
DMSO control
-1.5
-0.1
+0.1
+0.3
+0.3
stress
Paraquat dichloride 0.3 mg/ml
-1.1
+0.3
+0.2
+0.3
-0.5
nitrogen source
nitrate (N)
-1.0
+0.2
+0.3
+0.1
-0.2
pH
LB, pH6
-1.0
-0.2
+0.6
+0.1
-0.0
nitrogen source
Gelatin (N)
+0.6
+0.1
+0.0
+0.0
-0.8
stress
D-Cycloserine 0.05 mg/ml
-0.3
+0.2
+0.6
+0.2
-0.4
nitrogen source
L-Asparagine (N)
+0.9
-0.1
-0.1
+0.1
-0.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
+1.7
-0.0
-0.5
-0.2
+0.1
nitrogen source
Cytosine (N)
+1.4
-0.0
-0.2
+0.3
-0.5
nitrogen source
D-Glucosamine Hydrochloride (N)
+1.2
+0.3
-0.2
+0.2
-0.4
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+1.4
+0.2
+0.1
-0.4
+0.3
stress
Polymyxin B sulfate 0.00005 mg/ml
+1.1
+0.0
+0.1
+0.2
+0.6
stress
Aluminum chloride
+2.0
+0.2
-0.0
-0.2
+0.1
stress
Chlorite 0.1 mM
+1.5
+0.3
+0.2
-0.0
+0.3
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