Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMa1636 and SMa1637 are separated by 30 nucleotidesSMa1637 and SMa1639 are separated by 598 nucleotidesSMa1639 and SMa1641 are separated by 12 nucleotidesSMa1641 and SMa1643 overlap by 4 nucleotides SMa1636: SMa1636 - transposase TRm17a, at 911,789 to 912,589 SMa1636 SMa1637: SMa1637 - transposase TRm17b, at 912,620 to 913,126 SMa1637 SMa1639: SMa1639 - hypothetical protein, at 913,725 to 914,000 SMa1639 SMa1641: SMa1641 - NreB protein, at 914,013 to 915,335 SMa1641 SMa1643: SMa1643 - hypothetical protein, at 915,332 to 915,670 SMa1643
Group Condition SMa1636 SMa1637 SMa1639 SMa1641 SMa1643
stress Nickel (II) chloride 1 mM N.D. N.D. -3.4 -6.6 -0.4
nitrogen source Cytosine (N) N.D. N.D. -3.0 -0.3 -0.4
stress nitrate 40 mM N.D. N.D. -2.5 -0.2 -0.3
nitrogen source L-Arginine (N) N.D. N.D. -2.5 -0.4 +0.1
r2a control R2A control N.D. N.D. -3.2 +0.1 +0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. N.D. -2.0 -0.1 -0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. N.D. -1.5 -0.3 -0.3
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI N.D. N.D. -1.4 -0.2 -0.4
nitrogen source L-Histidine (N) N.D. N.D. -1.0 -0.0 -1.0
stress 3-octanone 2.655166667 mM N.D. N.D. -1.8 -0.2 +0.1
carbon source methyl-beta-D-xylopyranoside (C) N.D. N.D. -1.6 -0.3 +0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. N.D. -1.3 -0.2 -0.2
r2a control R2A control for volatile experiments N.D. N.D. -1.4 +0.0 -0.4
carbon source Lactitol (C) N.D. N.D. -1.2 +0.1 -0.6
pH LB, pH6 N.D. N.D. -1.1 -0.2 -0.3
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI N.D. N.D. -1.2 -0.1 -0.3
stress 1-octen-3-ol 0.6030326667 mM N.D. N.D. -1.1 -0.3 -0.2
carbon source Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C) N.D. N.D. -1.5 -0.2 +0.1
pH LB, pH8 N.D. N.D. -1.3 +0.1 -0.4
stress 6-Pentyl-2H-pyran-2-one 0.4557668333 mM N.D. N.D. -0.8 +0.0 -0.7
nitrogen source L-Leucine (N) N.D. N.D. -1.1 +0.1 -0.4
stress 6-Pentyl-2H-pyran-2-one 0.385649 mM N.D. N.D. -1.4 -0.1 +0.2
r2a control R2A control for volatile experiments N.D. N.D. -1.4 +0.0 +0.3
stress A22 0.02 mg/ml N.D. N.D. -1.3 +0.0 +0.5
carbon source L-Alanine (C) N.D. N.D. -1.0 +0.0 +0.5
stress Thallium(I) acetate 0.0025 mg/ml N.D. N.D. +1.0 -0.0 -0.5
nitrogen source L-Glutamine (N) N.D. N.D. +1.6 -0.4 -0.1
stress Paraquat dichloride 0.2 mg/ml N.D. N.D. +1.3 +0.1 +0.1
carbon source Xylobiose (C) N.D. N.D. +1.5 +0.0 +0.1
stress Paraquat dichloride 0.3 mg/ml N.D. N.D. +1.8 -0.1 +0.6
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