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Cofit
Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMa1593 and SMa1594 are separated by 29 nucleotides
SMa1594 and SMa1595 are separated by 243 nucleotides
SMa1595 and SMa1597 are separated by 449 nucleotides
SMa1597 and SMa1600 are separated by 128 nucleotides
SMa1593: SMa1593 - oxidoreductase, fragment, at 887,977 to 889,107
SMa1593
SMa1594: SMa1594 - hypothetical protein, at 889,137 to 889,790
SMa1594
SMa1595: SMa1595 - hypothetical protein, at 890,034 to 890,477
SMa1595
SMa1597: SMa1597 - Pilus assembly chaperone, at 890,927 to 891,709
SMa1597
SMa1600: SMa1600 - Potassium efflux protein, at 891,838 to 893,592
SMa1600
Group
Condition
SMa1593
SMa1594
SMa1595
SMa1597
SMa1600
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.3
+0.1
+0.3
-3.9
-0.1
stress
1-octen-3-ol 0.5427293333 mM
+0.1
-1.0
-1.1
-0.1
-0.1
dmso control
DMSO control
+0.0
-0.3
-0.3
-1.3
-0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
-0.1
-0.3
-1.3
+0.3
-0.5
lb no stress control
LB no stress control
-0.2
-0.1
-0.2
-1.0
-0.3
stress
1-octen-3-ol 0.5427293333 mM
-0.2
-0.2
-0.5
-0.6
-0.3
volatiles
R2A-HEPES with volatiles from Trichoderma atroviridae IMI
-0.1
-0.3
-0.3
-0.7
-0.1
stress
6-Pentyl-2H-pyran-2-one 0.4557668333 mM
-0.2
-0.4
-0.4
-0.4
-0.1
lb no stress control
LB no stress control
-0.2
-0.1
-0.8
+0.4
-0.1
stress
Aluminum chloride
+0.0
+0.3
-0.8
-0.4
+0.1
stress
3-octanone 0.456 mM
-0.0
-0.4
-0.5
+0.5
-0.1
stress
3-octanone 5.310333333 mM
-0.0
-0.3
-0.5
+0.6
-0.2
stress
Cobalt chloride 0.16 mM
+0.1
+0.3
-1.1
+0.3
+0.1
stress
Cisplatin 0.0005 mg/ml
+0.3
-0.6
-0.2
+0.3
-0.0
carbon source
L-Rhamnose (C)
-0.2
+0.3
-0.8
+0.3
+0.1
carbon source
D-Glucose (C)
-0.2
-0.2
-0.3
+0.7
+0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.2
-0.3
-0.5
+0.5
+0.1
stress
Paraquat dichloride 0.2 mg/ml
-0.1
+0.2
-0.5
+0.4
+0.3
carbon source
L-Arabinose (C)
+0.2
+0.3
-0.7
+0.3
+0.3
carbon source
D-Xylose (C)
-0.0
+0.2
-0.4
+0.8
-0.2
carbon source
acetate (C)
-0.1
+0.2
-0.1
+0.9
-0.3
stress
perchlorate 10 mM
+0.6
+0.5
-0.1
-0.0
-0.2
nitrogen source
Uridine (N)
-0.1
-0.5
+0.3
+0.9
+0.2
stress
nitrate 40 mM
+0.1
-0.2
-0.2
+0.8
+0.4
nitrogen source
L-Histidine (N)
-0.1
-0.8
+0.6
+1.0
+0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.5
-0.3
+0.5
+0.5
+0.0
nitrogen source
D-Glucosamine Hydrochloride (N)
+0.2
+0.0
+0.5
+0.8
-0.0
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.7
-0.1
+0.1
+0.7
+0.1
lb
LB
+0.7
+0.3
+0.2
+0.5
-0.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.1
+0.0
+0.4
+1.4
+0.0
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