Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMa1576 and SMa1578 are separated by 42 nucleotidesSMa1578 and SMa1579 are separated by 259 nucleotidesSMa1579 and SMa1580 are separated by 112 nucleotidesSMa1580 and SMa1582 are separated by 98 nucleotides SMa1576: SMa1576 - CpaB2 pilus assembly protein, at 871,597 to 872,388 SMa1576 SMa1578: SMa1578 - CpaA2 pilus assembly protein, at 872,431 to 872,943 SMa1578 SMa1579: SMa1579 - hypothetical protein, at 873,203 to 874,498 SMa1579 SMa1580: SMa1580 - hypothetical protein, at 874,611 to 875,123 SMa1580 SMa1582: SMa1582 - hypothetical protein, at 875,222 to 876,520 SMa1582
Group Condition SMa1576 SMa1578 SMa1579 SMa1580 SMa1582
stress Cisplatin 0.001 mg/ml -0.5 -0.5 -0.2 N.D. +0.2
stress Cisplatin 0.0005 mg/ml -0.2 -0.6 -0.1 N.D. -0.1
stress copper (II) chloride 1 mM -0.4 -0.6 +0.0 N.D. -0.1
stress Paraquat dichloride 0.2 mg/ml -1.1 -0.1 +0.1 N.D. +0.2
stress Nickel (II) chloride 1 mM -0.7 -0.1 -0.0 N.D. -0.1
stress Thallium(I) acetate 0.001 mg/ml -0.1 -0.5 -0.2 N.D. -0.2
stress copper (II) chloride 1 mM -0.7 -0.4 +0.2 N.D. -0.0
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -0.1 -0.1 N.D. -0.0
r2a control R2A control for volatile experiments +0.1 -0.6 -0.2 N.D. -0.0
stress Thallium(I) acetate 0.0025 mg/ml -0.3 -0.6 +0.2 N.D. +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.1 +0.0 -0.5 N.D. -0.4
nitrogen source Uridine (N) +0.2 -0.4 -0.3 N.D. -0.1
stress Fusidic 0.0001 mg/ml -0.6 +0.1 -0.2 N.D. -0.0
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) -0.4 -0.4 -0.2 N.D. +0.3
lb LB -0.7 -0.1 +0.2 N.D. +0.1
pH LB, pH8 -0.4 -0.3 -0.1 N.D. +0.1
stress Sisomicin 0.004 mg/ml -0.1 -0.5 -0.1 N.D. +0.1
pH LB, pH6 -0.5 +0.4 -0.2 N.D. -0.0
stress D-Cycloserine 0.05 mg/ml -0.4 -0.2 +0.0 N.D. +0.2
lb LB -0.4 -0.2 -0.1 N.D. +0.2
nitrogen source D-Glucosamine Hydrochloride (N) -0.6 +0.4 -0.0 N.D. -0.1
pH LB, pH7 -0.5 +0.2 -0.1 N.D. +0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.2 +0.3 -0.2 N.D. -0.1
nitrogen source Cytosine (N) -0.5 +0.5 -0.1 N.D. +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 +0.3 -0.1 N.D. +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 +0.5 +0.0 N.D. +0.2
nitrogen source L-Leucine (N) -0.2 +0.6 -0.1 N.D. -0.1
dmso control DMSO control -0.1 +0.4 -0.1 N.D. +0.2
nitrogen source L-Asparagine (N) -0.0 +0.6 -0.2 N.D. +0.3
nitrogen source NAG (N) +0.5 +0.4 -0.2 N.D. +0.0
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