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Cofit
Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMa1503 and SMa1505 are separated by 216 nucleotides
SMa1505 and SMa1507 are separated by 53 nucleotides
SMa1507 and SMa1509 are separated by 84 nucleotides
SMa1509 and SMa1513 are separated by 25 nucleotides
SMa1503: SMa1503 - hypothetical protein, at 829,300 to 830,166
SMa1503
SMa1505: SMa1505 - GntR family transcriptional regulator, at 830,383 to 831,168
SMa1505
SMa1507: SMa1507 - hypothetical protein, at 831,222 to 832,316
SMa1507
SMa1509: SMa1509 - ATP transporter ATP-binding protein, at 832,401 to 833,936
SMa1509
SMa1513: SMa1513 - ABC transporter permease, at 833,962 to 834,984
SMa1513
Group
Condition
SMa1503
SMa1505
SMa1507
SMa1509
SMa1513
stress
Sisomicin 0.004 mg/ml
-0.1
-0.5
-0.2
-0.4
-0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
-0.2
+0.0
-0.3
-0.5
-0.2
stress
Cisplatin 0.0005 mg/ml
-0.2
-0.1
+0.2
-0.5
-0.4
stress
Paraquat dichloride 0.2 mg/ml
-0.0
-0.0
-0.1
-0.1
-0.7
carbon source
Lactitol (C)
-0.1
-0.0
-0.3
-0.3
-0.2
carbon source
Myristic (C)
+0.1
-0.4
-0.1
-0.3
-0.3
stress
Chlorite 0.1 mM
+0.1
+0.0
-0.3
-0.2
-0.5
volatiles
R2A-HEPES with volatiles from Trichoderma atroviridae IMI
-0.4
-0.4
+0.1
+0.2
-0.2
stress
Thallium(I) acetate 0.001 mg/ml
+0.1
-0.2
+0.0
-0.2
-0.4
carbon source
acetate (C)
+0.1
-0.8
-0.2
+0.2
-0.0
nitrogen source
L-Asparagine (N)
+0.2
-0.1
-0.2
+0.2
-0.6
stress
Polymyxin B sulfate 0.00005 mg/ml
+0.1
-0.2
-0.1
+0.3
-0.7
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.1
-0.4
-0.1
+0.4
-0.2
stress
Thallium(I) acetate 0.0025 mg/ml
-0.2
-0.1
+0.4
-0.3
+0.0
nitrogen source
Cytosine (N)
+0.1
-0.1
-0.1
+0.5
-0.5
dmso control
DMSO control
-0.1
-0.2
+0.4
+0.2
-0.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.2
-0.1
+0.1
-0.4
+0.4
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.3
-0.2
+0.5
-0.0
+0.2
r2a control
R2A control for volatile experiments
-0.1
+0.1
+0.4
+0.1
-0.3
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.3
-0.0
+0.4
-0.0
+0.3
r2a control
R2A control for volatile experiments
-0.2
-0.2
+0.2
+0.4
+0.2
r2a control
R2A control for volatile experiments
-0.1
-0.2
+0.3
+0.3
+0.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.2
-0.1
-0.2
+0.4
+0.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.1
-0.3
-0.0
+0.6
+0.1
r2a-hepes control
R2A-HEPES control for volatile experiments
+0.1
-0.2
+0.3
+0.4
-0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.2
-0.2
+0.0
+0.5
+0.4
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.0
-0.4
+0.1
+0.6
+0.3
stress
perchlorate 10 mM
-0.0
+0.2
+0.1
+0.7
-0.1
stress
Aluminum chloride
+0.4
-0.2
+0.2
+0.1
+0.3
r2a-hepes control
R2A-HEPES control for volatile experiments
+0.0
-0.0
+0.5
+0.7
+0.2
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