Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMa5030 and SMa1337 are separated by 355 nucleotidesSMa1337 and SMa1339 are separated by 142 nucleotidesSMa1339 and SMa1341 are separated by 1 nucleotidesSMa1341 and SMa1344 are separated by 196 nucleotides SMa5030: SMa5030 - TetR family transcriptional regulator, at 730,316 to 730,981 SMa5030 SMa1337: SMa1337 - ABC transporter substrate-binding protein, at 731,337 to 732,644 SMa1337 SMa1339: SMa1339 - ABC transporter permease, at 732,787 to 733,692 SMa1339 SMa1341: SMa1341 - ABC transporter permease, at 733,694 to 734,653 SMa1341 SMa1344: SMa1344 - ABC transporter ATP-binding protein, at 734,850 to 735,959 SMa1344
Group Condition SMa5030 SMa1337 SMa1339 SMa1341 SMa1344
r2a control R2A control for volatile experiments -0.2 -0.1 -0.8 +0.1 -0.6
r2a control R2A control for volatile experiments -0.1 -0.2 -0.5 -0.1 -0.3
r2a-hepes control R2A-HEPES control for volatile experiments -0.4 -0.1 -0.4 -0.1 -0.2
stress 6-Pentyl-2H-pyran-2-one 0.4557668333 mM -0.2 +0.1 -0.2 -0.3 -0.1
stress 6-Pentyl-2H-pyran-2-one 0.4557668333 mM +0.3 -0.1 -0.3 -0.0 -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.4 +0.1 +0.2 -0.4 +0.1
pH LB, pH6 -0.5 +0.2 +0.2 -0.1 -0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.9 +0.3 +0.1 +0.2 +0.2
nutrient L-Histidine -0.4 +0.1 -0.1 +0.1 +0.2
carbon source L-Lysine (C) +0.1 -0.3 +0.1 -0.2 +0.3
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) -0.8 +0.3 +0.3 +0.4 +0.0
nitrogen source Uridine (N) +0.3 -0.2 -0.2 +0.2 +0.1
carbon source D-Salicin (C) +0.0 +0.3 -0.3 +0.1 +0.2
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) -0.3 +0.5 -0.1 +0.4 -0.0
stress Chlorite 0.1 mM +0.5 -0.0 -0.1 +0.3 -0.2
carbon source Methyl beta-D-glucopyranoside (C) +0.5 +0.1 -0.1 +0.2 -0.2
carbon source Mannobiose (C) +0.4 +0.2 -0.0 -0.1 +0.2
nitrogen source NAG (N) -0.2 +0.1 +0.3 +0.1 +0.4
carbon source L-Alanine (C) +0.5 +0.1 +0.1 -0.2 +0.2
carbon source D-Xylose (C) +0.3 +0.0 +0.4 -0.2 +0.1
stress Thallium(I) acetate 0.0025 mg/ml -0.0 +0.3 +0.2 +0.3 -0.1
stress Thallium(I) acetate 0.001 mg/ml +0.2 +0.3 +0.1 +0.3 +0.1
stress Cisplatin 0.001 mg/ml +0.4 +0.2 +0.1 -0.0 +0.3
nitrogen source L-Histidine (N) +0.4 +0.0 +0.1 +0.2 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.2 +0.2 +0.2 +0.3 +0.0
stress Paraquat dichloride 0.3 mg/ml +0.6 +0.3 -0.2 +0.0 +0.3
nitrogen source L-Asparagine (N) +0.9 -0.0 +0.3 -0.0 +0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.0 +0.3 +0.1 +0.4 +0.5
stress nitrate 40 mM +0.6 +0.3 +0.0 +0.3 +0.2
stress Cisplatin 0.0005 mg/ml +0.6 +0.2 +0.4 +0.2 +0.0
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