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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMa5030 and SMa1337 are separated by 355 nucleotides
SMa1337 and SMa1339 are separated by 142 nucleotides
SMa1339 and SMa1341 are separated by 1 nucleotides
SMa1341 and SMa1344 are separated by 196 nucleotides
SMa5030: SMa5030 - TetR family transcriptional regulator, at 730,316 to 730,981
SMa5030
SMa1337: SMa1337 - ABC transporter substrate-binding protein, at 731,337 to 732,644
SMa1337
SMa1339: SMa1339 - ABC transporter permease, at 732,787 to 733,692
SMa1339
SMa1341: SMa1341 - ABC transporter permease, at 733,694 to 734,653
SMa1341
SMa1344: SMa1344 - ABC transporter ATP-binding protein, at 734,850 to 735,959
SMa1344
Group
Condition
SMa5030
SMa1337
SMa1339
SMa1341
SMa1344
r2a control
R2A control for volatile experiments
-0.2
-0.1
-0.8
+0.1
-0.6
r2a control
R2A control for volatile experiments
-0.1
-0.2
-0.5
-0.1
-0.3
r2a-hepes control
R2A-HEPES control for volatile experiments
-0.4
-0.1
-0.4
-0.1
-0.2
stress
6-Pentyl-2H-pyran-2-one 0.4557668333 mM
-0.2
+0.1
-0.2
-0.3
-0.1
stress
6-Pentyl-2H-pyran-2-one 0.4557668333 mM
+0.3
-0.1
-0.3
-0.0
-0.4
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
-0.4
+0.1
+0.2
-0.4
+0.1
pH
LB, pH6
-0.5
+0.2
+0.2
-0.1
-0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.9
+0.3
+0.1
+0.2
+0.2
nutrient
L-Histidine
-0.4
+0.1
-0.1
+0.1
+0.2
carbon source
L-Lysine (C)
+0.1
-0.3
+0.1
-0.2
+0.3
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
-0.8
+0.3
+0.3
+0.4
+0.0
nitrogen source
Uridine (N)
+0.3
-0.2
-0.2
+0.2
+0.1
carbon source
D-Salicin (C)
+0.0
+0.3
-0.3
+0.1
+0.2
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
-0.3
+0.5
-0.1
+0.4
-0.0
stress
Chlorite 0.1 mM
+0.5
-0.0
-0.1
+0.3
-0.2
carbon source
Methyl beta-D-glucopyranoside (C)
+0.5
+0.1
-0.1
+0.2
-0.2
carbon source
Mannobiose (C)
+0.4
+0.2
-0.0
-0.1
+0.2
nitrogen source
NAG (N)
-0.2
+0.1
+0.3
+0.1
+0.4
carbon source
L-Alanine (C)
+0.5
+0.1
+0.1
-0.2
+0.2
carbon source
D-Xylose (C)
+0.3
+0.0
+0.4
-0.2
+0.1
stress
Thallium(I) acetate 0.0025 mg/ml
-0.0
+0.3
+0.2
+0.3
-0.1
stress
Thallium(I) acetate 0.001 mg/ml
+0.2
+0.3
+0.1
+0.3
+0.1
stress
Cisplatin 0.001 mg/ml
+0.4
+0.2
+0.1
-0.0
+0.3
nitrogen source
L-Histidine (N)
+0.4
+0.0
+0.1
+0.2
+0.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.2
+0.2
+0.2
+0.3
+0.0
stress
Paraquat dichloride 0.3 mg/ml
+0.6
+0.3
-0.2
+0.0
+0.3
nitrogen source
L-Asparagine (N)
+0.9
-0.0
+0.3
-0.0
+0.0
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.0
+0.3
+0.1
+0.4
+0.5
stress
nitrate 40 mM
+0.6
+0.3
+0.0
+0.3
+0.2
stress
Cisplatin 0.0005 mg/ml
+0.6
+0.2
+0.4
+0.2
+0.0
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