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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMa1334 and SMa5030 are separated by 81 nucleotides
SMa5030 and SMa1337 are separated by 355 nucleotides
SMa1337 and SMa1339 are separated by 142 nucleotides
SMa1339 and SMa1341 are separated by 1 nucleotides
SMa1334: SMa1334 - hypothetical protein, at 729,038 to 730,234
SMa1334
SMa5030: SMa5030 - TetR family transcriptional regulator, at 730,316 to 730,981
SMa5030
SMa1337: SMa1337 - ABC transporter substrate-binding protein, at 731,337 to 732,644
SMa1337
SMa1339: SMa1339 - ABC transporter permease, at 732,787 to 733,692
SMa1339
SMa1341: SMa1341 - ABC transporter permease, at 733,694 to 734,653
SMa1341
Group
Condition
SMa1334
SMa5030
SMa1337
SMa1339
SMa1341
r2a control
R2A control for volatile experiments
-0.3
-0.1
-0.2
-0.5
-0.1
r2a control
R2A control for volatile experiments
+0.1
-0.2
-0.1
-0.8
+0.1
r2a-hepes control
R2A-HEPES control for volatile experiments
-0.3
-0.2
-0.2
-0.3
-0.1
stress
6-Pentyl-2H-pyran-2-one 0.4557668333 mM
-0.2
-0.2
+0.1
-0.2
-0.3
nutrient
L-Histidine
-0.4
-0.3
+0.1
-0.1
+0.1
r2a control
R2A control for volatile experiments
-0.2
-0.0
-0.2
-0.4
+0.3
r2a-hepes control
R2A-HEPES control for volatile experiments
+0.4
-0.4
-0.1
-0.4
-0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
-0.0
-0.4
+0.1
+0.2
-0.4
stress
6-Pentyl-2H-pyran-2-one 0.4557668333 mM
+0.2
+0.2
+0.1
-0.4
-0.2
stress
Aluminum chloride
+0.6
-0.2
-0.0
-0.4
-0.0
pH
LB, pH6
+0.3
-0.5
+0.2
+0.2
-0.1
nitrogen source
Uridine (N)
+0.0
+0.3
-0.2
-0.2
+0.2
carbon source
L-Alanine (C)
-0.3
+0.5
+0.1
+0.1
-0.2
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
-0.1
-0.3
+0.5
-0.1
+0.4
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.7
-0.9
+0.3
+0.1
+0.2
stress
D-Cycloserine 0.05 mg/ml
+0.3
-0.3
+0.4
-0.0
+0.0
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.4
+0.1
+0.0
+0.3
-0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.3
+0.0
+0.3
+0.1
+0.4
stress
Thallium(I) acetate 0.0025 mg/ml
-0.2
-0.0
+0.3
+0.2
+0.3
stress
Paraquat dichloride 0.3 mg/ml
+0.1
+0.6
+0.3
-0.2
+0.0
stress
Chlorite 0.1 mM
+0.2
+0.5
-0.0
-0.1
+0.3
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
+0.8
-0.8
+0.3
+0.3
+0.4
carbon source
Methyl beta-D-glucopyranoside (C)
+0.2
+0.5
+0.1
-0.1
+0.2
stress
Paraquat dichloride 0.2 mg/ml
+0.5
+0.3
+0.2
-0.1
+0.1
stress
Cisplatin 0.0005 mg/ml
-0.2
+0.6
+0.2
+0.4
+0.2
nitrogen source
L-Asparagine (N)
+0.1
+0.9
-0.0
+0.3
-0.0
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.4
+0.2
+0.2
+0.2
+0.3
stress
nitrate 40 mM
+0.2
+0.6
+0.3
+0.0
+0.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.8
+0.2
+0.1
+0.3
+0.1
stress
Polymyxin B sulfate 0.00005 mg/ml
+0.9
+0.3
+0.2
+0.0
+0.1
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