Fitness for 5 genes in Sinorhizobium meliloti 1021

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 243 experiments or choose conditions or try the comparative fitness browser

500 ntSMa1327 and SMa1328 are separated by 597 nucleotidesSMa1328 and SMa1329 are separated by 588 nucleotidesSMa1329 and SMa1331 are separated by 34 nucleotidesSMa1331 and SMa1332 are separated by 29 nucleotides SMa1327: SMa1327 - hydrolase, at 723,087 to 723,935 SMa1327 SMa1328: SMa1328 - MtbA protein, at 724,533 to 725,855 SMa1328 SMa1329: SMa1329 - Peptidase, at 726,444 to 727,706 SMa1329 SMa1331: SMa1331 - hypothetical protein, at 727,741 to 728,154 SMa1331 SMa1332: SMa1332 - hypothetical protein, at 728,184 to 729,026 SMa1332
Group Condition SMa1327 SMa1328 SMa1329 SMa1331 SMa1332
nitrogen source L-Histidine (N) -0.2 -0.0 -0.4 +0.1 -0.3
pH LB, pH6 -0.1 -0.4 -0.1 +0.1 -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.1 -0.4 +0.0 -0.4 -0.0
nitrogen source L-Serine (N) -0.2 -0.0 -0.4 -0.1 +0.2
r2a control R2A control for volatile experiments -0.1 -0.4 +0.0 -0.3 +0.1
nitrogen source L-Arginine (N) -0.1 -0.1 -0.1 -0.6 +0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.0 +0.0 -0.6 -0.2 +0.2
stress Cisplatin 0.0005 mg/ml -0.1 +0.2 -0.3 +0.0 -0.4
carbon source methyl 3-keto-a-D-glucopyranoside (C) -0.1 +0.0 +0.1 -0.2 -0.3
stress copper (II) chloride 1 mM -0.2 -0.2 +0.3 +0.1 -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +0.1 -0.1 -0.4 -0.3
stress Nickel (II) chloride 1 mM -0.2 -0.1 +0.2 -0.3 +0.2
stress Thallium(I) acetate 0.0025 mg/ml -0.4 -0.1 +0.1 +0.2 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.0 +0.2 -0.5 +0.1 +0.1
carbon source Protocatechuic Acid (C) -0.2 +0.1 -0.3 +0.2 +0.2
r2a control R2A control for volatile experiments -0.1 -0.3 +0.3 +0.1 +0.0
stress 6-Pentyl-2H-pyran-2-one 0.4557668333 mM -0.2 +0.1 -0.2 +0.2 +0.1
stress Polymyxin B sulfate 0.00005 mg/ml -0.0 +0.1 -0.1 +0.4 -0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.2 +0.3 -0.2 +0.3 -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.2 +0.0 +0.3 +0.4 -0.3
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) +0.3 +0.1 -0.2 +0.1 +0.1
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) +0.4 -0.1 +0.3 -0.0 -0.1
carbon source Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C) +0.2 +0.0 +0.4 -0.2 -0.1
nitrogen source D-Glucosamine Hydrochloride (N) -0.2 +0.3 +0.0 +0.3 +0.1
nitrogen source L-Asparagine (N) -0.2 +0.1 +0.2 +0.2 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.1 +0.2 -0.2 +0.3 +0.4
stress 6-Pentyl-2H-pyran-2-one 0.385649 mM -0.1 -0.0 +0.2 +0.5 +0.2
lb no stress control LB no stress control +0.1 +0.1 +0.3 +0.1 +0.3
stress 6-Pentyl-2H-pyran-2-one 0.385649 mM +0.0 -0.0 +0.2 +0.3 +0.3
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI +0.3 +0.1 +0.3 +0.1 +0.0
remove
SMa1327
plot
remove
SMa1328
plot
remove
SMa1329
remove
SMa1331
plot
remove
SMa1332
plot