Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMa1210 and SMa1211 overlap by 4 nucleotidesSMa1211 and SMa1213 are separated by 228 nucleotidesSMa1213 and SMa1214 are separated by 3 nucleotidesSMa1214 and SMa1216 are separated by 12 nucleotides SMa1210: SMa1210 - nitrogen fixation protein FixH, at 665,057 to 665,560 SMa1210 SMa1211: SMa1211 - FixG iron sulfur membrane protein, at 665,557 to 667,131 SMa1211 SMa1213: SMa1213 - FixP1 di-heme cytochrome c, at 667,360 to 668,229 SMa1213 SMa1214: SMa1214 - FixQ1 nitrogen fixation protein, at 668,233 to 668,385 SMa1214 SMa1216: SMa1216 - cbb3-type cytochrome c oxidase subunit II, at 668,398 to 669,129 SMa1216
Group Condition SMa1210 SMa1211 SMa1213 SMa1214 SMa1216
stress copper (II) chloride 1 mM -1.1 -0.0 -0.0 N.D. -0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.1 -0.2 -0.5 N.D. -0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8 -0.0 -0.1 N.D. -0.3
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) -0.7 -0.7 +0.2 N.D. +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.3 -0.4 +0.0 N.D. -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8 -0.0 +0.3 N.D. -0.2
stress perchlorate 10 mM -0.5 -0.1 -0.3 N.D. +0.3
stress 3-octanone 0.456 mM -0.6 +0.2 -0.3 N.D. +0.2
stress Chlorite 0.1 mM -0.5 -0.1 -0.3 N.D. +0.4
tsb Day4 LB +0.4 +0.2 -0.5 N.D. -0.6
r2a-hepes control R2A-HEPES control for volatile experiments -0.7 +0.3 -0.0 N.D. +0.1
pH LB, pH8 +0.6 -0.1 -0.3 N.D. -0.1
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI -0.3 +0.3 +0.3 N.D. -0.2
pH LB, pH6 +0.9 +0.2 -0.8 N.D. +0.0
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 -0.3 +0.2 N.D. +0.0
nitrogen source Cytosine (N) -0.3 +0.2 +0.7 N.D. +0.2
tsb Day4 TSB -0.2 +0.2 +0.4 N.D. +0.5
carbon source pipercolic (C) +0.5 +0.2 +0.1 N.D. +0.2
carbon source Fumarate (C) +0.4 +0.1 +0.3 N.D. +0.3
lb LB +0.4 +0.2 +0.1 N.D. +0.3
carbon source L-Glutamine (C) +0.5 +0.1 +0.6 N.D. -0.0
nitrogen source L-Asparagine (N) +0.7 +0.1 +0.3 N.D. +0.0
nutrient L-Histidine +0.5 +0.1 +0.4 N.D. +0.2
carbon source D-Glucosamine Hydrochloride (C) +0.4 +0.1 +0.4 N.D. +0.2
carbon source succinate (C) +0.7 +0.1 +0.0 N.D. +0.3
carbon source D-Ribose (C) +0.4 +0.1 +0.3 N.D. +0.4
nitrogen source Gly-DL-Asp (N) +0.1 +0.2 +0.8 N.D. +0.3
carbon source Myristic (C) +0.3 +0.2 +0.6 N.D. +0.3
nutrient L-Lysine +0.5 +0.2 +0.4 N.D. +0.2
nutrient L-Lysine +0.8 +0.1 +0.2 N.D. +0.3
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