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Cofit
Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMa1146 and SMa1147 are separated by 77 nucleotides
SMa1147 and SMa1149 are separated by 137 nucleotides
SMa1149 and SMa1151 are separated by 58 nucleotides
SMa1151 and SMa1153 are separated by 145 nucleotides
SMa1146: SMa1146 - hypothetical protein, at 623,735 to 626,434
SMa1146
SMa1147: SMa1147 - hypothetical protein, at 626,512 to 627,336
SMa1147
SMa1149: SMa1149 - hypothetical protein, at 627,474 to 628,307
SMa1149
SMa1151: SMa1151 - hypothetical protein, at 628,366 to 628,821
SMa1151
SMa1153: SMa1153 - hypothetical protein, at 628,967 to 629,641
SMa1153
Group
Condition
SMa1146
SMa1147
SMa1149
SMa1151
SMa1153
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.2
-0.8
-0.9
-0.4
+0.1
stress
Cisplatin 0.0005 mg/ml
-0.3
+0.0
+0.2
-1.0
-0.3
stress
Nickel (II) chloride 1 mM
+0.0
+0.3
-0.4
+0.0
-0.9
pH
LB, pH8
-0.3
+0.3
+0.1
-0.7
+0.2
nitrogen source
L-Arginine (N)
-0.3
+0.1
+0.5
+0.3
-1.0
lb no stress control
LB no stress control
-0.1
-0.5
+0.3
-0.1
+0.4
nitrogen source
NAG (N)
+0.1
+0.1
+0.6
-0.1
-0.6
nitrogen source
L-Leucine (N)
-0.3
-0.0
+0.6
-0.5
+0.4
stress
Paraquat dichloride 0.2 mg/ml
+0.1
+0.3
+0.5
-0.3
-0.3
nitrogen source
L-Histidine (N)
+0.2
-0.4
-0.2
-0.0
+0.8
nitrogen source
Cytosine (N)
+0.1
-0.2
+0.3
-0.4
+0.7
carbon source
Lactitol (C)
-0.2
+0.1
+0.5
-0.1
+0.7
stress
Polymyxin B sulfate 0.00005 mg/ml
-0.2
-0.2
+0.6
+0.6
+0.3
carbon source
D-Glucose (C)
+0.3
+0.2
+0.2
-0.1
+0.7
carbon source
5-Aminovaleric (C)
+0.4
+0.1
+0.3
-0.0
+0.7
carbon source
Fumarate (C)
+0.2
+0.1
+0.3
+0.2
+0.6
carbon source
L-Arabinose (C)
+0.3
+0.2
+0.5
+0.2
+0.4
carbon source
Protocatechuic Acid (C)
+0.3
+0.2
+0.4
+0.0
+0.7
lb
LB
+0.2
+0.3
+0.3
+0.3
+0.5
carbon source
pipercolic (C)
+0.4
+0.3
+0.6
-0.1
+0.3
carbon source
D-Ribose (C)
+0.3
+0.2
+0.4
+0.2
+0.5
carbon source
succinate (C)
+0.3
+0.3
+0.2
+0.2
+0.5
carbon source
L-Lysine (C)
+0.4
+0.0
+0.5
+0.2
+0.4
carbon source
Protocatechuic Acid (C)
+0.3
+0.2
+0.5
+0.3
+0.2
carbon source
L-Arabinose (C)
+0.5
+0.1
+0.4
+0.1
+0.8
carbon source
Fumarate (C)
+0.4
+0.3
+0.6
-0.0
+0.7
carbon source
Myristic (C)
+0.3
+0.1
+0.4
+0.3
+0.7
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
+0.3
+0.2
+0.2
+0.7
+0.6
carbon source
D-Mannitol (C)
+0.3
+0.2
+0.8
+0.2
+0.5
carbon source
L-Lysine (C)
+0.3
+0.3
+0.6
+0.3
+0.9
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