Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMa1087 and SMa1089 overlap by 4 nucleotidesSMa1089 and SMa1091 overlap by 4 nucleotidesSMa1091 and SMa1092 are separated by 223 nucleotidesSMa1092 and SMa1093 are separated by 253 nucleotides SMa1087: SMa1087 - cation transport P-type ATPase, at 594,396 to 596,597 SMa1087 SMa1089: SMa1089 - hypothetical protein, at 596,594 to 596,797 SMa1089 SMa1091: SMa1091 - hypothetical protein, at 596,794 to 597,297 SMa1091 SMa1092: SMa1092 - hypothetical protein, at 597,521 to 598,030 SMa1092 SMa1093: SMa1093 - hypothetical protein, at 598,284 to 598,616 SMa1093
Group Condition SMa1087 SMa1089 SMa1091 SMa1092 SMa1093
stress copper (II) chloride 1 mM -0.4 N.D. -1.2 -0.7 +0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.1 N.D. +0.5 -1.7 -0.3
nitrogen source Cytosine (N) -0.3 N.D. -0.6 -0.3 -0.3
carbon source Lactitol (C) +0.0 N.D. -0.8 -0.2 -0.3
nitrogen source L-Asparagine (N) -0.0 N.D. +0.2 -1.1 -0.2
stress Cisplatin 0.001 mg/ml +0.3 N.D. -0.3 -0.6 -0.6
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 N.D. -0.1 -0.8 +0.1
lb no stress control LB no stress control -0.2 N.D. +0.2 -0.5 -0.5
stress Aluminum chloride +0.5 N.D. -0.3 -1.3 +0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 N.D. +0.3 -0.6 -0.2
pH LB, pH6 +0.1 N.D. +0.3 -0.5 -0.4
nitrogen source Uridine (N) -0.1 N.D. +0.1 -0.9 +0.4
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI -0.2 N.D. -0.2 +0.6 -0.7
r2a-hepes control R2A-HEPES control for volatile experiments +0.0 N.D. -0.0 +0.4 -0.8
stress Polymyxin B sulfate 0.00005 mg/ml +0.3 N.D. -0.2 -0.9 +0.6
stress D-Cycloserine 0.05 mg/ml +0.2 N.D. -0.0 -0.9 +0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 N.D. +0.3 +0.6 -0.2
nitrogen source Gly-DL-Asp (N) -0.2 N.D. +0.5 -0.5 +0.5
carbon source succinate (C) -0.1 N.D. +0.3 -0.3 +0.5
r2a-hepes control R2A-HEPES control for volatile experiments +0.0 N.D. +0.2 +0.6 -0.4
r2a-hepes control R2A-HEPES control for volatile experiments -0.2 N.D. +0.2 +0.8 -0.3
nitrogen source L-Arginine (N) +0.3 N.D. +0.2 +0.7 -0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 N.D. +0.1 +1.1 +0.4
carbon source L-Lysine (C) +0.2 N.D. +0.1 +0.5 +0.4
carbon source D-Glucose (C) +0.3 N.D. +0.2 +0.5 +0.2
carbon source L-Alanine (C) +0.3 N.D. +0.4 +0.4 +0.2
carbon source succinate (C) +0.2 N.D. +0.2 +0.3 +0.6
carbon source D-Xylose (C) +0.2 N.D. +0.3 +0.6 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 N.D. +0.5 +0.7 +0.6
carbon source acetate (C) +0.3 N.D. +0.4 +0.3 +0.7
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