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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMa1067 and SMa1070 are separated by 786 nucleotides
SMa1070 and SMa1073 overlap by 31 nucleotides
SMa1073 and SMa1076 are separated by 576 nucleotides
SMa1076 and SMa1077 are separated by 161 nucleotides
SMa1067: SMa1067 - transcriptional regulator, at 583,446 to 584,192
SMa1067
SMa1070: SMa1070 - TRm23a transposase, at 584,979 to 586,571
SMa1070
SMa1073: SMa1073 - TRm23b IS ATP-binding protein, at 586,541 to 587,278
SMa1073
SMa1076: SMa1076 - hypothetical protein, at 587,855 to 588,439
SMa1076
SMa1077: SMa1077 - Nex18 symbiotically induced protein, at 588,601 to 589,083
SMa1077
Group
Condition
SMa1067
SMa1070
SMa1073
SMa1076
SMa1077
dmso control
DMSO control
-0.3
-0.1
-2.2
-0.0
-0.3
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.0
+0.3
-3.0
+0.4
-0.5
dmso control
DMSO control
-0.1
-0.2
-1.9
+0.1
-0.6
stress
6-Pentyl-2H-pyran-2-one 0.385649 mM
-0.1
+0.1
-2.2
-0.2
-0.2
stress
6-Pentyl-2H-pyran-2-one 0.4177863333 mM
-0.4
+0.2
-1.0
-0.3
-0.5
stress
1-octen-3-ol 0.5427293333 mM
-0.2
+0.1
-1.5
-0.3
-0.2
r2a-hepes control
R2A-HEPES control for volatile experiments
-0.3
+0.2
-1.6
-0.4
+0.1
stress
3-octanone 5.310333333 mM
-0.5
-0.4
-1.0
+0.1
-0.1
stress
6-Pentyl-2H-pyran-2-one 0.4557668333 mM
+0.0
-0.0
-1.6
-0.4
+0.1
stress
3-octanone 2.655166667 mM
-0.2
+0.1
-1.6
-0.1
+0.0
r2a control
R2A control for volatile experiments
-0.2
-0.2
-1.3
-0.2
+0.3
stress
3-octanone 2.655166667 mM
+0.2
-0.0
-1.2
+0.2
-0.3
nutrient
L-Histidine
+0.2
-0.0
+0.1
+0.2
-1.1
stress
Polymyxin B sulfate 0.00005 mg/ml
-0.2
-0.2
+0.6
+0.2
-0.6
nitrogen source
NAG (N)
+0.3
+0.2
+0.7
-0.5
-0.8
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.0
-0.0
+1.1
-0.0
-1.0
carbon source
methyl 3-keto-a-D-glucopyranoside (C)
+0.3
-0.0
-0.7
-0.0
+0.6
nitrogen source
L-Arginine (N)
+0.3
-0.2
-0.6
-0.0
+0.7
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.0
-0.3
+1.2
-0.4
-0.2
stress
Aluminum chloride
+0.4
-0.1
+0.8
-0.0
-0.4
stress
6-Pentyl-2H-pyran-2-one 0.385649 mM
-0.1
+0.1
+0.7
-0.4
+0.3
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
+0.2
+0.2
-0.8
+0.7
+0.5
stress
Paraquat dichloride 0.2 mg/ml
-0.1
+0.2
+0.4
-0.2
+0.7
stress
nitrate 40 mM
+0.2
-0.1
+0.9
+0.3
+0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.2
-0.2
+0.6
+0.3
+0.5
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
+0.3
+0.3
+0.8
+0.4
-0.3
stress
Cisplatin 0.001 mg/ml
+0.2
-0.3
+1.4
-0.1
+0.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.1
+0.1
+0.6
+0.4
+0.4
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
-0.1
+0.0
+1.6
-0.1
+0.6
stress
Thallium(I) acetate 0.0025 mg/ml
+0.2
+0.2
+1.7
+0.1
+0.1
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