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Cofit
Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMa1032 and SMa1033 are separated by 197 nucleotides
SMa1033 and SMa1036 are separated by 52 nucleotides
SMa1036 and SMa1037 overlap by 4 nucleotides
SMa1037 and SMa1038 are separated by 14 nucleotides
SMa1032: SMa1032 - hypothetical protein, at 569,367 to 569,612
SMa1032
SMa1033: SMa1033 - hypothetical protein, at 569,810 to 570,190
SMa1033
SMa1036: SMa1036 - hypothetical protein, at 570,243 to 570,512
SMa1036
SMa1037: SMa1037 - hypothetical protein, at 570,509 to 571,975
SMa1037
SMa1038: SMa1038 - copper-containing oxidase, at 571,990 to 573,339
SMa1038
Group
Condition
SMa1032
SMa1033
SMa1036
SMa1037
SMa1038
stress
copper (II) chloride 1 mM
N.D.
-0.8
-0.5
-0.2
-0.2
carbon source
L-Lysine (C)
N.D.
-0.3
-0.7
-0.4
-0.1
stress
Thallium(I) acetate 0.0025 mg/ml
N.D.
-0.5
+0.0
-0.5
-0.4
carbon source
D-Ribose (C)
N.D.
-0.2
-0.8
-0.1
-0.0
carbon source
Protocatechuic Acid (C)
N.D.
-0.0
-0.9
-0.2
-0.0
nitrogen source
L-Arginine (N)
N.D.
-0.7
-0.4
+0.2
-0.2
carbon source
succinate (C)
N.D.
+0.1
-0.8
-0.2
-0.1
carbon source
5-Aminovaleric (C)
N.D.
+0.2
-0.4
-0.7
-0.1
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
N.D.
-0.3
-0.6
+0.1
-0.1
stress
perchlorate 10 mM
N.D.
-0.8
+0.3
-0.4
+0.0
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
-0.5
-0.4
-0.1
+0.2
stress
3-octanone 2.655166667 mM
N.D.
+0.2
-0.5
-0.3
-0.1
stress
Paraquat dichloride 0.3 mg/ml
N.D.
+0.0
-1.0
-0.0
+0.2
stress
6-Pentyl-2H-pyran-2-one 0.4177863333 mM
N.D.
-0.4
-0.4
+0.1
+0.0
carbon source
D-Mannose (C)
N.D.
+0.5
-0.6
-0.4
-0.1
stress
Aluminum chloride
N.D.
-0.6
+0.3
-0.2
-0.0
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
-0.4
-0.3
-0.2
+0.3
dmso control
DMSO control
N.D.
-0.0
-0.7
+0.4
+0.0
carbon source
D-Xylose (C)
N.D.
+0.4
-0.8
+0.2
-0.0
nitrogen source
L-Asparagine (N)
N.D.
-0.6
+0.6
-0.2
-0.0
r2a-hepes control
R2A-HEPES control for volatile experiments
N.D.
-0.5
-0.1
+0.2
+0.3
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
-0.0
-0.5
+0.5
-0.0
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
+0.7
+0.2
-0.6
-0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
+0.6
-0.5
-0.1
+0.4
stress
3-octanone 2.655166667 mM
N.D.
-0.4
+0.2
+0.4
+0.2
r2a-hepes control
R2A-HEPES control for volatile experiments
N.D.
-0.2
+0.6
-0.1
+0.3
nitrogen source
Cytosine (N)
N.D.
-0.5
+0.7
+0.3
+0.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
+0.5
+0.1
+0.3
+0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
+0.5
+0.5
+0.2
+0.1
stress
Cisplatin 0.001 mg/ml
N.D.
+0.9
+0.4
+0.1
-0.1
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