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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMa0998 and SMa1001 are separated by 348 nucleotides
SMa1001 and SMa1002 are separated by 154 nucleotides
SMa1002 and SMa1004 are separated by 236 nucleotides
SMa1004 and SMa1005 are separated by 78 nucleotides
SMa0998: SMa0998 - ISRm25b transposase, at 553,516 to 554,085
SMa0998
SMa1001: SMa1001 - hypothetical protein, at 554,434 to 555,633
SMa1001
SMa1002: SMa1002 - hypothetical protein, at 555,788 to 556,162
SMa1002
SMa1004: SMa1004 - hypothetical protein, at 556,399 to 556,761
SMa1004
SMa1005: SMa1005 - hypothetical protein, at 556,840 to 557,640
SMa1005
Group
Condition
SMa0998
SMa1001
SMa1002
SMa1004
SMa1005
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
+0.1
-0.8
-5.3
-0.7
-0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.2
-1.0
-4.4
-0.1
+0.2
nitrogen source
L-Leucine (N)
-0.1
+0.4
-4.2
-0.9
+0.3
nitrogen source
L-Histidine (N)
+0.0
+0.4
-4.3
-0.8
+0.7
stress
6-Pentyl-2H-pyran-2-one 0.385649 mM
+0.1
-0.1
-3.7
+0.2
-0.2
stress
Nickel (II) chloride 1 mM
+0.9
-0.1
-4.0
-0.4
+0.0
r2a control
R2A control for volatile experiments
-0.2
-0.1
-2.7
+0.1
-0.6
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.0
-0.2
-2.1
-0.1
-0.5
stress
6-Pentyl-2H-pyran-2-one 0.4177863333 mM
+0.2
-0.3
-2.6
+0.2
-0.3
nitrogen source
D-Glucosamine Hydrochloride (N)
-0.3
-0.1
-1.4
-0.1
-0.3
stress
6-Pentyl-2H-pyran-2-one 0.4557668333 mM
-0.0
-0.4
-1.6
+0.0
-0.2
stress
Thallium(I) acetate 0.001 mg/ml
-0.1
-0.0
-1.5
-0.4
+0.0
stress
6-Pentyl-2H-pyran-2-one 0.4177863333 mM
+0.1
+0.3
-2.4
+0.2
-0.1
nitrogen source
L-Arginine (N)
-0.4
-0.2
-1.1
-0.7
+0.4
r2a control
R2A control
-0.4
+0.1
-1.5
+0.1
-0.2
nutrient
L-Histidine
-0.0
+0.1
-1.6
-0.3
+0.0
stress
Paraquat dichloride 0.2 mg/ml
-0.1
-0.7
-1.2
-0.1
+0.2
lb no stress control
LB no stress control
+0.0
+0.3
-2.0
+0.1
-0.1
lb no stress control
LB no stress control
+0.6
+0.1
-2.2
+0.2
-0.2
stress
Aluminum chloride
-0.4
+0.3
-1.5
+0.5
-0.4
nitrogen source
Cytosine (N)
-0.5
-0.0
-1.2
+0.2
+0.2
stress
Polymyxin B sulfate 0.00005 mg/ml
-0.3
+0.3
-1.1
+0.4
-0.4
carbon source
Maltitol (C)
+0.2
+0.4
-1.5
+0.0
+0.2
volatiles
R2A-HEPES with volatiles from Trichoderma atroviridae IMI
-0.1
+0.6
-1.1
+0.4
-0.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.7
+0.1
+0.8
+0.2
-0.4
pH
LB, pH6
-0.2
+0.3
+1.1
-0.0
-0.5
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.2
-0.5
+1.0
+0.6
-0.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.3
+0.4
+1.6
-0.3
-0.1
stress
3-octanone 0.456 mM
+0.5
+0.0
+1.3
+0.0
-0.3
dmso control
DMSO control
+0.5
-0.1
+1.3
+0.2
-0.1
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