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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMa0988 and SMa0990 are separated by 657 nucleotides
SMa0990 and SMa0992 are separated by 67 nucleotides
SMa0992 and SMa5007 are separated by 56 nucleotides
SMa5007 and SMa0995 are separated by 524 nucleotides
SMa0988: SMa0988 - hypothetical protein, at 548,397 to 548,690
SMa0988
SMa0990: SMa0990 - hypothetical protein, at 549,348 to 549,827
SMa0990
SMa0992: SMa0992 - hypothetical protein, at 549,895 to 550,287
SMa0992
SMa5007: SMa5007 - transcriptional regulator, at 550,344 to 550,724
SMa5007
SMa0995: SMa0995 - TRm5 transposase, at 551,249 to 552,481
SMa0995
Group
Condition
SMa0988
SMa0990
SMa0992
SMa5007
SMa0995
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
-0.5
-1.2
-0.1
-0.4
-0.3
nitrogen source
L-Asparagine (N)
-0.2
+0.5
-2.3
-0.3
-0.0
stress
3-octanone 5.310333333 mM
+0.0
+0.1
-0.5
-0.4
-1.2
r2a control
R2A control for volatile experiments
+0.1
-0.7
-0.4
-0.4
-0.5
stress
3-octanone 2.655166667 mM
+0.1
-0.4
+0.1
-0.1
-1.6
volatiles
R2A-HEPES with volatiles from Trichoderma atroviridae IMI
+0.1
-0.3
+0.1
-0.8
-0.9
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
+0.2
+0.2
-0.1
-0.7
-1.1
volatiles
R2A-HEPES with volatiles from Trichoderma atroviridae IMI
-0.1
-0.6
+0.4
-0.7
-0.4
stress
Cisplatin 0.001 mg/ml
-0.4
+0.2
-1.9
+0.5
+0.3
stress
6-Pentyl-2H-pyran-2-one 0.385649 mM
+0.3
-0.6
+0.3
-0.2
-1.0
stress
3-octanone 0.456 mM
-0.1
-0.4
+0.5
-0.2
-1.1
r2a-hepes control
R2A-HEPES control for volatile experiments
-0.2
+0.0
+0.5
-0.9
-0.5
carbon source
methyl-beta-D-xylopyranoside (C)
+0.1
-0.2
-0.6
+0.3
-0.6
stress
copper (II) chloride 1 mM
+0.1
+0.3
-0.6
+0.2
-1.0
nitrogen source
L-Arginine (N)
-0.2
+0.0
-0.2
+0.5
-1.1
stress
Cisplatin 0.0005 mg/ml
+0.2
-0.3
-1.5
+0.2
+0.6
stress
1-octen-3-ol 0.4933903333 mM
+0.2
-0.6
+0.5
-0.3
-0.5
lb no stress control
LB no stress control
+0.3
-0.7
+0.7
-0.1
-0.7
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.1
+0.3
+0.5
-0.2
-1.3
pH
LB, pH8
-0.2
+0.2
-0.8
+0.5
-0.3
stress
6-Pentyl-2H-pyran-2-one 0.4557668333 mM
+0.0
-0.1
+0.4
+0.3
-1.1
stress
Paraquat dichloride 0.3 mg/ml
-0.0
-0.2
-0.9
+0.6
+0.4
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
-0.0
+0.3
+0.5
+0.1
-1.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.1
-0.4
+0.0
+0.7
-0.6
carbon source
Maltitol (C)
+0.2
+0.2
+0.5
-0.6
-0.4
nitrogen source
L-Leucine (N)
-0.3
-0.6
+0.7
-0.1
+0.4
lb no stress control
LB no stress control
+0.1
-0.3
+0.6
-0.5
+0.5
r2a control
R2A control
+0.1
+0.6
-0.5
+0.2
+0.9
lb
LB
-0.3
+0.5
+0.3
+0.9
+0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.3
+0.2
+0.6
+0.5
+0.6
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