Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMa0976 and SMa0977 are separated by 326 nucleotidesSMa0977 and SMa0981 are separated by 520 nucleotidesSMa0981 and SMa0983 are separated by 148 nucleotidesSMa0983 and SMa0985 are separated by 120 nucleotides SMa0976: SMa0976 - TRm3 transposase, at 543,828 to 544,616 SMa0976 SMa0977: SMa0977 - TRm24 transposase, at 544,943 to 545,944 SMa0977 SMa0981: SMa0981 - NtrR2 transcription regulator, at 546,465 to 546,884 SMa0981 SMa0983: SMa0983 - hypothetical protein, at 547,033 to 547,404 SMa0983 SMa0985: SMa0985 - LysR family transcriptional regulator, at 547,525 to 548,370 SMa0985
Group Condition SMa0976 SMa0977 SMa0981 SMa0983 SMa0985
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant N.D. N.D. -0.5 -0.5 +0.1
carbon source Fumarate (C) N.D. N.D. -0.3 -0.2 -0.4
carbon source Fumarate (C) N.D. N.D. -0.4 -0.3 -0.1
carbon source L-Alanine (C) N.D. N.D. -0.3 -0.2 -0.3
r2a control R2A control for volatile experiments N.D. N.D. -0.5 -0.2 -0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. N.D. -0.4 -0.3 -0.1
carbon source D-Glucose (C) N.D. N.D. -0.3 -0.3 -0.1
carbon source D-Mannitol (C) N.D. N.D. -0.2 -0.2 -0.3
stress 1-octen-3-ol 0.5427293333 mM N.D. N.D. -0.4 +0.0 -0.3
carbon source L-Lysine (C) N.D. N.D. -0.4 -0.1 -0.2
carbon source L-Arabinose (C) N.D. N.D. -0.1 -0.4 -0.2
nitrogen source Gly-DL-Asp (N) N.D. N.D. +0.3 -0.5 -0.2
dmso control DMSO control N.D. N.D. -0.5 +0.2 -0.0
r2a control R2A control for volatile experiments N.D. N.D. -0.6 +0.1 +0.1
stress Cisplatin 0.0005 mg/ml N.D. N.D. +0.3 -0.3 -0.3
nitrogen source nitrate (N) N.D. N.D. +0.5 -0.5 -0.3
nutrient Min media with glucose N.D. N.D. -0.5 +0.2 +0.1
nitrogen source L-Histidine (N) N.D. N.D. +0.3 -0.2 -0.2
stress Paraquat dichloride 0.05 mg/ml N.D. N.D. +0.3 -0.2 -0.1
stress copper (II) chloride 1 mM N.D. N.D. +0.0 +0.3 -0.3
stress 3-octanone 2.655166667 mM N.D. N.D. -0.2 +0.4 -0.2
nitrogen source Gelatin (N) N.D. N.D. +0.4 -0.2 -0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. N.D. -0.1 -0.2 +0.6
nitrogen source L-Asparagine (N) N.D. N.D. +0.7 -0.1 -0.1
carbon source D-Xylose (C) N.D. N.D. +0.3 +0.3 -0.1
stress 3-octanone 5.310333333 mM N.D. N.D. -0.1 +0.3 +0.3
carbon source Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C) N.D. N.D. +0.2 +0.3 +0.3
lb no stress control LB no stress control N.D. N.D. +0.2 +0.5 +0.1
nitrogen source L-Arginine (N) N.D. N.D. +0.6 -0.1 +0.3
dmso control DMSO control N.D. N.D. +0.5 +0.4 +0.1
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