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Cofit
Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMa0911 and SMa0914 are separated by 327 nucleotides
SMa0914 and SMa0917 are separated by 136 nucleotides
SMa0917 and SMa5006 are separated by 566 nucleotides
SMa5006 and SMa0922 are separated by 619 nucleotides
SMa0911: SMa0911 - hypothetical protein, at 507,448 to 508,479
SMa0911
SMa0914: SMa0914 - hypothetical protein, at 508,807 to 509,748
SMa0914
SMa0917: SMa0917 - hypothetical protein, at 509,885 to 510,211
SMa0917
SMa5006: SMa5006 - hypothetical protein, at 510,778 to 511,137
SMa5006
SMa0922: SMa0922 - hypothetical protein, at 511,757 to 512,080
SMa0922
Group
Condition
SMa0911
SMa0914
SMa0917
SMa5006
SMa0922
lb
LB
-0.2
-0.6
-0.1
-0.2
-0.5
pH
LB, pH6
-0.1
-0.1
-0.3
-0.0
-0.8
stress
Cisplatin 0.0005 mg/ml
-0.0
-0.4
-0.1
+0.2
-1.0
lb
LB
-0.4
-0.1
-0.3
-0.1
-0.4
carbon source
5-Aminovaleric (C)
-0.1
-0.4
-0.2
+0.0
-0.5
stress
D-Cycloserine 0.05 mg/ml
-0.2
-0.5
-0.4
-0.2
+0.2
stress
Paraquat dichloride 0.3 mg/ml
-0.0
-0.5
+0.1
+0.2
-0.6
nitrogen source
NAG (N)
-0.6
+0.1
+0.2
+0.0
-0.6
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.0
-1.0
-0.0
-0.0
+0.2
nitrogen source
D-Glucosamine Hydrochloride (N)
-0.2
-0.1
+0.2
-0.1
-0.5
nitrogen source
L-Asparagine (N)
+0.2
+0.8
-0.9
+0.1
-0.8
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
-0.1
-0.6
-0.3
+0.3
-0.1
stress
copper (II) chloride 1 mM
+0.1
-0.7
+0.3
-0.2
-0.1
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
-0.3
-0.1
+0.1
+0.3
-0.4
nitrogen source
L-Leucine (N)
-0.2
+0.3
+0.3
+0.0
-0.9
stress
Polymyxin B sulfate 0.00005 mg/ml
+0.4
-0.3
-0.1
-0.5
+0.1
nitrogen source
Cytosine (N)
-0.3
-0.2
+0.3
+0.2
-0.3
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.0
-0.5
+0.5
-0.2
-0.0
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.3
+0.2
+0.1
+0.1
-1.0
stress
Aluminum chloride
+0.3
-0.4
+0.3
-0.0
-0.3
nitrogen source
Uridine (N)
-0.4
+0.4
+0.5
-0.1
-0.5
carbon source
Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
-0.3
-0.1
-0.2
+0.1
+0.6
nitrogen source
nitrate (N)
-0.3
+0.5
+0.4
-0.3
-0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.2
-0.4
+0.1
+0.3
+0.5
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
-0.2
+0.5
-0.2
-0.2
+0.5
r2a-hepes control
R2A-HEPES control for volatile experiments
+0.3
-0.2
-0.1
-0.2
+0.6
nitrogen source
Gelatin (N)
-0.3
+0.8
+0.3
+0.0
-0.3
nitrogen source
L-Glutamine (N)
-0.1
+0.0
+0.0
+0.5
+0.6
volatiles
R2A-HEPES with volatiles from Trichoderma atroviridae IMI
+0.3
+0.4
+0.3
+0.1
-0.1
stress
6-Pentyl-2H-pyran-2-one 0.385649 mM
+0.3
+0.4
+0.0
-0.0
+0.5
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