Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMa0873 and SMa0874 are separated by 87 nucleotidesSMa0874 and SMa0875 are separated by 6 nucleotidesSMa0875 and SMa0876 are separated by 3 nucleotidesSMa0876 and SMa0878 are separated by 57 nucleotides SMa0873: SMa0873 - nitrogenase molybdenum-cofactor biosynthesis protein NifN, at 483,756 to 485,081 SMa0873 SMa0874: SMa0874 - NodN dehydratase, at 485,169 to 485,654 SMa0874 SMa0875: SMa0875 - NolG efflux transporter, at 485,661 to 488,858 SMa0875 SMa0876: SMa0876 - NolF secretion protein, at 488,862 to 489,965 SMa0876 SMa0878: SMa0878 - glucosamine--fructose-6-phosphate aminotransferase, at 490,023 to 491,849 SMa0878
Group Condition SMa0873 SMa0874 SMa0875 SMa0876 SMa0878
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.4 -2.2 -0.1 +0.1 +0.2
stress 3-octanone 5.310333333 mM +0.1 +0.2 -0.1 +0.0 -1.8
stress 1-octen-3-ol 0.5427293333 mM +0.1 +0.4 -0.2 -0.1 -1.7
r2a control R2A control for volatile experiments -0.2 -0.8 -0.2 +0.1 -0.3
carbon source Lactulose (C) -0.1 -1.3 +0.1 -0.1 +0.0
stress 1-octen-3-ol 0.5427293333 mM -0.1 +0.7 -0.0 -0.4 -1.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 -0.7 +0.1 -0.1 -0.7
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.2 -0.2 +0.3 -0.1 -0.7
carbon source Methyl beta-D-glucopyranoside (C) -0.2 -0.4 +0.1 -0.4 +0.6
nitrogen source L-Asparagine (N) +0.3 -0.8 +0.1 -0.2 +0.4
nitrogen source L-Leucine (N) -0.1 +0.9 -0.0 -0.3 -0.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +0.8 +0.3 +0.0 -1.4
nitrogen source L-Arginine (N) -0.2 +0.3 +0.1 -0.6 +0.5
stress 1-octen-3-ol 0.5427293333 mM +0.1 +1.0 -0.0 -0.1 -0.8
pH LB, pH6 +0.4 +0.5 -0.0 -0.4 -0.2
dmso control DMSO control -0.0 +1.0 -0.0 -0.0 -0.5
stress copper (II) chloride 1 mM -0.2 +0.4 -0.3 +0.1 +0.7
stress 3-octanone 2.655166667 mM +0.1 +0.6 -0.1 -0.0 +0.5
stress Thallium(I) acetate 0.001 mg/ml -0.1 +0.5 -0.0 +0.2 +0.5
stress 3-octanone 0.456 mM +0.2 +0.4 -0.2 +0.1 +0.6
stress nitrate 40 mM -0.2 +0.8 +0.0 +0.2 +0.4
lb no stress control LB no stress control +0.2 +0.8 -0.1 +0.2 +0.4
stress 1-octen-3-ol 0.6030326667 mM -0.1 +1.3 -0.1 +0.1 +0.4
stress Chlorite 0.1 mM +0.1 -0.0 +0.1 +1.0 +0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.1 +0.6 +0.1 +0.4 +0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.1 +0.0 +0.1 +0.4 +0.9
stress Sisomicin 0.004 mg/ml -0.2 +1.0 +0.1 +0.0 +0.9
stress Nickel (II) chloride 1 mM -0.0 +0.6 +0.2 -0.0 +1.2
stress Aluminum chloride -0.0 +0.6 +0.1 +0.7 +1.4
stress Polymyxin B sulfate 0.00005 mg/ml -0.1 +0.7 +0.3 +0.4 +1.9
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