Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMa0868 and SMa0869 overlap by 4 nucleotidesSMa0869 and SMa0870 are separated by 265 nucleotidesSMa0870 and SMa0872 are separated by 687 nucleotidesSMa0872 and SMa0873 overlap by 1 nucleotides SMa0868: SMa0868 - NodB chitooligosaccharide deacetylase, at 480,304 to 480,957 SMa0868 SMa0869: SMa0869 - acyltransferase, at 480,954 to 481,544 SMa0869 SMa0870: SMa0870 - NodD1 nod-box dependent transcriptional activator, at 481,810 to 482,736 SMa0870 SMa0872: SMa0872 - hypothetical protein, at 483,424 to 483,756 SMa0872 SMa0873: SMa0873 - nitrogenase molybdenum-cofactor biosynthesis protein NifN, at 483,756 to 485,081 SMa0873
Group Condition SMa0868 SMa0869 SMa0870 SMa0872 SMa0873
stress Cisplatin 0.001 mg/ml -0.6 -0.9 -0.1 -1.2 -0.2
nitrogen source L-Arginine (N) -0.0 +0.0 -1.2 -0.2 -0.2
stress 1-octen-3-ol 0.4933903333 mM -0.5 -0.2 -0.3 -0.4 +0.1
r2a-hepes control R2A-HEPES control for volatile experiments +0.0 -0.5 -0.5 -0.5 +0.1
stress 3-octanone 2.655166667 mM -0.1 -0.6 -0.4 -0.3 +0.1
stress Sisomicin 0.004 mg/ml +0.0 +0.3 -0.3 -1.0 -0.2
lb LB -0.2 -0.4 +0.2 -0.5 -0.2
stress nitrate 40 mM -0.5 -0.3 +0.3 -0.4 -0.2
nitrogen source Uridine (N) -0.8 -0.0 -0.3 -0.0 +0.3
stress Thallium(I) acetate 0.001 mg/ml -0.0 -0.0 +0.4 -1.2 -0.1
r2a control R2A control for volatile experiments -0.2 -0.8 +0.1 +0.3 -0.2
stress 6-Pentyl-2H-pyran-2-one 0.4557668333 mM -0.4 -0.1 -0.7 +0.3 +0.2
stress Cisplatin 0.0005 mg/ml -0.0 +0.2 +0.3 -0.8 -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.1 +0.6 -0.3 -0.7 -0.3
nitrogen source L-Asparagine (N) +0.3 +0.3 -0.9 -0.4 +0.3
nitrogen source L-Leucine (N) -0.2 -0.7 +0.2 +0.4 -0.1
nitrogen source L-Glutamine (N) +0.2 -0.4 -0.5 +0.3 +0.2
stress D-Cycloserine 0.05 mg/ml -0.2 -0.0 +0.6 -0.6 -0.0
stress Polymyxin B sulfate 0.00005 mg/ml -0.4 +0.1 +0.8 -0.6 -0.1
pH LB, pH6 +0.4 -0.5 +0.6 -0.5 -0.0
stress copper (II) chloride 1 mM -0.3 +0.2 +0.5 -0.3 -0.2
stress Aluminum chloride +0.3 -0.2 +0.6 -0.7 -0.0
nitrogen source Cytosine (N) +0.2 -0.0 -0.7 +0.5 +0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.2 +0.6 +0.4 -0.4 +0.0
stress perchlorate 10 mM -0.1 -0.0 +1.4 -0.7 +0.3
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) +0.2 +0.4 +0.4 -0.4 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 +0.8 -0.4 +0.6 +0.3
lb LB +0.1 -0.2 +0.7 +0.4 +0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +0.5 +0.2 +0.2 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.2 +1.0 -0.5 +0.6 +0.5
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