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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMa0797 and SMa0799 are separated by 37 nucleotides
SMa0799 and SMa0800 are separated by 92 nucleotides
SMa0800 and SMa0802 are separated by 1 nucleotides
SMa0802 and SMa0803 overlap by 4 nucleotides
SMa0797: SMa0797 - hypothetical protein, at 435,497 to 435,823
SMa0797
SMa0799: SMa0799 - ABC transporter substrate-binding protein, at 435,861 to 436,871
SMa0799
SMa0800: SMa0800 - ABC transporter permease, at 436,964 to 437,839
SMa0800
SMa0802: SMa0802 - ABC transporter permease, at 437,841 to 438,641
SMa0802
SMa0803: SMa0803 - ABC transporter ATP-binding protein, at 438,638 to 439,717
SMa0803
Group
Condition
SMa0797
SMa0799
SMa0800
SMa0802
SMa0803
stress
Nickel (II) chloride 1 mM
-0.6
-0.3
-0.5
-0.2
-0.0
stress
Cisplatin 0.0005 mg/ml
-0.4
-0.2
-0.2
-0.4
-0.3
lb no stress control
LB no stress control
-0.8
-0.3
-0.0
-0.1
-0.1
nitrogen source
L-Arginine (N)
+0.0
+0.0
-0.6
-0.6
+0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-1.1
-0.2
-0.1
+0.6
-0.2
carbon source
5-Aminovaleric (C)
-0.9
-0.2
+0.3
+0.2
-0.1
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
-0.5
-0.3
+0.4
-0.2
+0.1
carbon source
D-Trehalose (C)
-0.9
+0.0
+0.1
+0.3
-0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.3
+0.3
+0.2
-0.3
-0.2
stress
Polymyxin B sulfate 0.00005 mg/ml
-0.8
-0.3
+0.4
-0.1
+0.6
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-1.2
+0.3
+0.3
+0.1
+0.2
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
-0.4
-0.0
+0.3
-0.4
+0.2
carbon source
D-Xylose (C)
-0.8
+0.1
+0.1
+0.2
+0.1
stress
Aluminum chloride
-0.5
-0.1
+0.4
-0.1
+0.2
stress
copper (II) chloride 1 mM
+0.8
-0.0
+0.1
-0.7
-0.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.5
-0.2
+0.2
+0.3
+0.2
volatiles
R2A-HEPES with volatiles from Trichoderma atroviridae IMI
+0.7
-0.1
-0.3
-0.3
+0.0
stress
copper (II) chloride 1 mM
-0.3
-0.2
+0.2
+0.3
+0.1
stress
Chlorite 0.1 mM
-0.1
-0.0
+0.5
-0.4
+0.2
r2a control
R2A control for volatile experiments
+0.5
-0.3
-0.0
+0.2
-0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-1.0
+0.2
+0.2
+0.5
+0.3
nitrogen source
NAG (N)
+0.5
-0.2
+0.2
-0.0
-0.2
r2a control
R2A control for volatile experiments
+0.4
-0.3
+0.3
+0.0
-0.1
carbon source
NAG (C)
+0.4
+0.0
-0.4
+0.2
+0.2
stress
Paraquat dichloride 0.2 mg/ml
+0.4
-0.3
+0.3
+0.1
+0.2
nitrogen source
L-Glutamine (N)
+0.6
+0.0
+0.1
+0.3
-0.1
volatiles
R2A-HEPES with volatiles from Trichoderma atroviridae IMI
+0.6
-0.1
-0.0
+0.3
+0.2
carbon source
Mannobiose (C)
+0.5
-0.1
+0.5
+0.1
-0.1
nitrogen source
D-Glucosamine Hydrochloride (N)
+0.4
+0.1
-0.1
+0.1
+0.4
nitrogen source
L-Asparagine (N)
+0.5
+0.1
+0.3
+0.3
+0.1
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