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Cofit
Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMa0769 and SMa0771 are separated by 188 nucleotides
SMa0771 and SMa0772 are separated by 102 nucleotides
SMa0772 and SMa0773 are separated by 387 nucleotides
SMa0773 and SMa0774 are separated by 6 nucleotides
SMa0769: SMa0769 - FixP2 Diheme c-type cytochrome, at 416,717 to 417,580
SMa0769
SMa0771: SMa0771 - hypothetical protein, at 417,769 to 418,242
SMa0771
SMa0772: SMa0772 - NodL Nod factor acetyltransferase, at 418,345 to 418,896
SMa0772
SMa0773: SMa0773 - NoeA host specific nodulation protein, at 419,284 to 420,714
SMa0773
SMa0774: SMa0774 - NoeB host specific nodulation protein, at 420,721 to 422,382
SMa0774
Group
Condition
SMa0769
SMa0771
SMa0772
SMa0773
SMa0774
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.3
-2.1
-0.3
-0.1
-0.1
r2a control
R2A control for volatile experiments
-0.8
-0.6
-0.1
-0.0
-0.5
r2a-hepes control
R2A-HEPES control for volatile experiments
-0.5
-0.2
-0.4
-0.1
-0.5
r2a control
R2A control for volatile experiments
-0.4
-0.7
-0.1
-0.2
-0.2
r2a-hepes control
R2A-HEPES control for volatile experiments
-0.4
-0.3
-0.5
-0.0
-0.4
stress
Chlorite 0.1 mM
-0.2
-1.3
+0.3
-0.4
+0.1
r2a control
R2A control for volatile experiments
+0.1
-1.0
-0.2
-0.5
+0.2
dmso control
DMSO control
+0.1
-0.5
-0.2
-0.4
-0.4
stress
3-octanone 2.655166667 mM
+0.0
-1.4
+0.1
+0.2
-0.2
stress
1-octen-3-ol 0.6030326667 mM
-0.1
+0.3
-0.3
-0.4
-0.6
r2a-hepes control
R2A-HEPES control for volatile experiments
-0.4
-0.3
+0.3
-0.2
-0.5
nitrogen source
Cytosine (N)
-0.2
+0.3
-0.7
-0.1
-0.2
stress
6-Pentyl-2H-pyran-2-one 0.385649 mM
+0.1
-0.9
+0.4
-0.2
-0.3
r2a control
R2A control for volatile experiments
+0.1
-0.5
+0.3
-0.3
-0.4
stress
1-octen-3-ol 0.5427293333 mM
+0.5
-0.6
-0.4
+0.2
-0.6
lb no stress control
LB no stress control
+0.4
-0.7
+0.2
+0.1
-0.6
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.3
+0.6
-1.1
+0.2
+0.1
carbon source
pipercolic (C)
+0.2
-0.9
+0.4
-0.1
+0.1
carbon source
L-Arabinose (C)
-0.2
-0.5
+0.7
-0.0
-0.4
lb
LB
+0.3
-0.6
-0.2
+0.6
+0.2
nitrogen source
L-Asparagine (N)
-0.6
+1.1
-0.4
+0.4
-0.3
carbon source
D-Glucose (C)
-0.1
+0.6
-0.4
-0.1
+0.4
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
-0.5
+0.0
-0.1
+0.4
+0.5
nitrogen source
L-Histidine (N)
+0.3
+0.7
-0.8
+0.5
+0.1
nitrogen source
L-Arginine (N)
-0.6
+0.6
+0.0
+0.0
+0.7
stress
6-Pentyl-2H-pyran-2-one 0.4177863333 mM
+0.3
+0.9
+0.3
-0.0
-0.4
stress
Paraquat dichloride 0.3 mg/ml
+0.3
+0.9
+0.1
-0.2
-0.0
stress
Paraquat dichloride 0.2 mg/ml
-0.1
+0.9
+0.2
+0.1
+0.3
stress
Cisplatin 0.0005 mg/ml
+0.4
+0.3
+0.4
-0.1
+0.5
carbon source
Methyl beta-D-glucopyranoside (C)
+0.1
+0.7
+0.6
+0.0
+0.1
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