Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMa0678 and SMa0680 are separated by 27 nucleotidesSMa0680 and SMa0682 are separated by 1 nucleotidesSMa0682 and SMa0683 are separated by 205 nucleotidesSMa0683 and SMa0684 are separated by 145 nucleotides SMa0678: SMa0678 - putrescine transporter, at 362,667 to 364,025 SMa0678 SMa0680: SMa0680 - amino acid (ornithine, lysine, arginine) decarboxylase, at 364,053 to 366,401 SMa0680 SMa0682: SMa0682 - decarboxylase (lysine, ornithine, arginine), at 366,403 to 368,673 SMa0682 SMa0683: SMa0683 - Cation efflux protein, at 368,879 to 369,805 SMa0683 SMa0684: SMa0684 - transport protein, at 369,951 to 371,276 SMa0684
Group Condition SMa0678 SMa0680 SMa0682 SMa0683 SMa0684
carbon source L-Fucose (C) -0.2 -0.2 -0.3 -0.5 -0.3
r2a control R2A control for volatile experiments +0.0 -0.1 -0.3 -0.1 -0.6
r2a-hepes control R2A-HEPES control for volatile experiments -0.1 -0.2 -0.2 -0.3 -0.4
dmso control DMSO control -0.1 -0.2 -0.2 -0.3 -0.3
stress 6-Pentyl-2H-pyran-2-one 0.385649 mM +0.0 +0.0 +0.0 -0.6 -0.5
stress 3-octanone 5.310333333 mM +0.0 -0.2 -0.1 -0.5 -0.3
r2a-hepes control R2A-HEPES control for volatile experiments -0.2 +0.0 -0.3 -0.3 -0.2
stress 3-octanone 2.655166667 mM -0.1 -0.1 -0.2 -0.4 -0.2
stress 1-octen-3-ol 0.6030326667 mM +0.1 -0.0 -0.3 -0.4 -0.2
stress 1-octen-3-ol 0.5427293333 mM +0.0 -0.0 -0.1 -0.7 -0.2
stress Chlorite 0.1 mM -0.0 +0.0 -0.2 -0.4 -0.3
dmso control DMSO control +0.1 -0.3 -0.2 -0.3 +0.1
carbon source D-Ribose (C) -0.0 -0.1 -0.2 +0.3 -0.4
stress Thallium(I) acetate 0.001 mg/ml -0.2 +0.1 +0.1 -0.6 +0.2
nitrogen source Uridine (N) -0.2 +0.1 +0.0 +0.2 -0.4
stress Nickel (II) chloride 1 mM -0.5 -0.0 -0.3 +0.5 +0.4
stress Cisplatin 0.001 mg/ml -0.2 -0.1 -0.0 +0.3 +0.4
nitrogen source L-Glutamine (N) -0.3 +0.1 +0.0 +0.8 -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.2 -0.1 -0.2 +0.4 +0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.1 +0.0 -0.2 +0.9 -0.1
carbon source succinate (C) -0.2 +0.0 +0.1 +0.6 +0.0
carbon source D-Mannitol (C) -0.1 -0.0 +0.2 +0.5 +0.2
carbon source D-Xylose (C) -0.1 -0.0 +0.1 +0.6 +0.2
carbon source pyruvate (C) -0.0 +0.1 +0.2 +0.5 +0.2
carbon source Fumarate (C) -0.0 +0.2 +0.2 +0.4 +0.2
nitrogen source L-Histidine (N) -0.1 +0.4 +0.0 +0.5 +0.2
nitrogen source Cytosine (N) +0.3 -0.1 +0.0 +0.6 +0.2
nitrogen source L-Leucine (N) +0.1 -0.0 -0.0 +0.7 +0.3
carbon source acetate (C) +0.1 +0.1 +0.1 +0.6 +0.4
carbon source L-Lysine (C) +0.1 +0.2 +0.2 +0.6 +0.3
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