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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMa5027 and SMa0656 are separated by 396 nucleotides
SMa0656 and SMa0657 are separated by 150 nucleotides
SMa0657 and SMa0659 are separated by 25 nucleotides
SMa0659 and SMa0661 are separated by 366 nucleotides
SMa5027: SMa5027 - hypothetical protein, at 347,249 to 347,851
SMa5027
SMa0656: SMa0656 - TRm24 transposase, at 348,248 to 349,249
SMa0656
SMa0657: SMa0657 - cytochrome c binding protein, amino terminus, at 349,400 to 349,597
SMa0657
SMa0659: SMa0659 - cytochrome c binding protein, carboxyl terminus, at 349,623 to 350,021
SMa0659
SMa0661: SMa0661 - hypothetical protein, at 350,388 to 350,867
SMa0661
Group
Condition
SMa5027
SMa0656
SMa0657
SMa0659
SMa0661
carbon source
5-Aminovaleric (C)
-0.3
N.D.
-0.3
-0.9
-0.0
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.2
N.D.
-0.4
-1.0
+0.0
stress
perchlorate 10 mM
-0.8
N.D.
+0.2
-0.2
-0.6
pH
LB, pH6
+0.2
N.D.
-0.7
-0.5
-0.3
stress
copper (II) chloride 1 mM
+0.4
N.D.
-0.9
-0.4
-0.3
nutrient
Min media with glucose
+0.2
N.D.
+0.0
-1.0
-0.5
nitrogen source
L-Arginine (N)
-0.0
N.D.
-0.7
+0.6
-0.7
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.4
N.D.
-0.7
-0.3
-0.2
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
-0.0
N.D.
-0.7
-0.4
+0.5
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
-0.6
N.D.
-0.5
+0.5
-0.0
r2a control
R2A control for volatile experiments
-0.3
N.D.
+0.8
-1.0
+0.0
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.6
N.D.
-0.4
-0.6
-0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.7
N.D.
-0.5
-0.3
-0.3
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.1
N.D.
-0.7
+1.4
-0.8
carbon source
D-Leucrose (C)
+0.7
N.D.
-0.3
-0.5
-0.1
stress
3-octanone 0.456 mM
+0.0
N.D.
-0.2
-0.6
+0.7
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.9
N.D.
-0.0
+0.7
+0.2
stress
Paraquat dichloride 0.2 mg/ml
-0.4
N.D.
-0.4
+0.6
+0.4
stress
Paraquat dichloride 0.2 mg/ml
+0.3
N.D.
+0.4
-0.7
+0.1
nitrogen source
Gly-DL-Asp (N)
+0.2
N.D.
-0.3
+0.9
-0.5
carbon source
D-Glucose (C)
+0.8
N.D.
-0.2
-0.4
+0.2
nitrogen source
L-Leucine (N)
+0.5
N.D.
-0.2
+0.5
-0.4
lb no stress control
LB no stress control
+0.4
N.D.
-0.3
+0.9
-0.4
stress
Aluminum chloride
-0.2
N.D.
+0.7
-0.2
+0.4
stress
nitrate 40 mM
+0.4
N.D.
-0.6
+0.6
+0.3
stress
Polymyxin B sulfate 0.00005 mg/ml
-0.4
N.D.
+0.9
+0.5
+0.0
nitrogen source
L-Histidine (N)
+0.0
N.D.
-0.6
+1.4
+0.3
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.2
N.D.
+0.1
+1.0
+0.3
stress
6-Pentyl-2H-pyran-2-one 0.4177863333 mM
+0.4
N.D.
-0.4
+0.8
+0.3
stress
Paraquat dichloride 0.3 mg/ml
-0.1
N.D.
+0.1
+0.9
+0.6
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