Fitness for 5 genes in Sinorhizobium meliloti 1021

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 243 experiments or choose conditions or try the comparative fitness browser

500 ntSMa0612 and SMa0615 are separated by 4 nucleotidesSMa0615 and SMa0616 are separated by 22 nucleotidesSMa0616 and SMa0617 overlap by 10 nucleotidesSMa0617 and SMa0620 are separated by 218 nucleotides SMa0612: SMa0612 - cbb3-type cytochrome c oxidase subunit I, at 326,972 to 328,627 SMa0612 SMa0615: SMa0615 - cbb3-type cytochrome c oxidase subunit II, at 328,632 to 329,384 SMa0615 SMa0616: SMa0616 - FixQ3 nitrogen fixation protein, at 329,407 to 329,577 SMa0616 SMa0617: SMa0617 - FixP3 Diheme c-type cytochrome, at 329,568 to 330,449 SMa0617 SMa0620: SMa0620 - hypothetical protein, at 330,668 to 331,474 SMa0620
Group Condition SMa0612 SMa0615 SMa0616 SMa0617 SMa0620
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.3 -0.3 N.D. -0.3 -0.6
nitrogen source L-Leucine (N) +0.0 -0.8 N.D. -0.1 -0.2
stress Paraquat dichloride 0.3 mg/ml +0.1 -0.5 N.D. -0.1 -0.3
stress Cisplatin 0.0005 mg/ml +0.0 -0.7 N.D. -0.0 -0.1
nitrogen source Uridine (N) -0.0 -0.4 N.D. -0.2 -0.1
nitrogen source L-Asparagine (N) +0.1 -0.1 N.D. -0.5 -0.3
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) -0.1 -0.6 N.D. -0.1 +0.0
nitrogen source Gelatin (N) +0.1 -0.5 N.D. -0.3 +0.1
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI +0.0 -0.3 N.D. +0.1 -0.4
stress Sisomicin 0.004 mg/ml -0.1 -0.4 N.D. +0.2 -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.1 -0.3 N.D. -0.6 +0.3
stress nitrate 40 mM +0.0 +0.0 N.D. +0.1 -0.7
r2a control R2A control for volatile experiments +0.0 +0.1 N.D. +0.2 -0.6
nitrogen source Cytosine (N) +0.0 -0.1 N.D. -0.4 +0.3
stress Chloride 200 mM +0.1 -0.2 N.D. -0.3 +0.3
carbon source D-Fructose (C) +0.1 -0.3 N.D. -0.2 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.2 -0.3 N.D. -0.2 +0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.2 -0.2 N.D. +0.1 +0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.1 -0.5 N.D. +0.0 +0.5
stress Paraquat dichloride 0.05 mg/ml +0.1 -0.3 N.D. -0.0 +0.3
stress Polymyxin B sulfate 0.00005 mg/ml -0.4 -0.0 N.D. +0.3 +0.2
stress 1-octen-3-ol 0.5427293333 mM +0.1 +0.2 N.D. +0.2 -0.4
carbon source D-Ribose (C) +0.1 +0.3 N.D. +0.1 -0.3
nitrogen source L-Arginine (N) +0.1 -0.1 N.D. +0.5 -0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.2 +0.1 N.D. -0.1 +0.5
stress Paraquat dichloride 0.2 mg/ml -0.0 -0.4 N.D. +0.3 +0.5
carbon source Lactitol (C) +0.1 +0.1 N.D. -0.2 +0.5
lb no stress control LB no stress control +0.0 +0.1 N.D. +0.3 +0.4
stress 6-Pentyl-2H-pyran-2-one 0.4557668333 mM +0.2 +0.3 N.D. +0.1 +0.3
stress 6-Pentyl-2H-pyran-2-one 0.4557668333 mM +0.1 +0.1 N.D. +0.3 +0.5
remove
SMa0612
plot
remove
SMa0615
plot
remove
SMa0616
remove
SMa0617
plot
remove
SMa0620
plot