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Cofit
Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMa0545 and SMa0548 overlap by 1 nucleotides
SMa0548 and SMa0551 are separated by 339 nucleotides
SMa0551 and SMa0552 are separated by 92 nucleotides
SMa0552 and SMa0554 overlap by 23 nucleotides
SMa0545: SMa0545 - hypothetical protein, at 291,198 to 291,638
SMa0545
SMa0548: SMa0548 - hypothetical protein, at 291,638 to 291,877
SMa0548
SMa0551: SMa0551 - N-ethylammeline chlorohydrolase, at 292,217 to 293,509
SMa0551
SMa0552: SMa0552 - cyclic amidohydrolase, at 293,602 to 294,093
SMa0552
SMa0554: SMa0554 - hypothetical protein, at 294,071 to 294,868
SMa0554
Group
Condition
SMa0545
SMa0548
SMa0551
SMa0552
SMa0554
carbon source
L-Lactate (C)
-1.2
N.D.
-0.3
-0.0
-0.2
nitrogen source
L-Arginine (N)
-1.6
N.D.
+0.0
+0.2
-0.1
stress
3-octanone 5.310333333 mM
-1.4
N.D.
-0.0
-0.0
+0.0
lb no stress control
LB no stress control
-1.3
N.D.
-0.0
+0.1
-0.1
lb no stress control
LB no stress control
-1.7
N.D.
+0.3
+0.1
-0.0
dmso control
DMSO control
-1.0
N.D.
-0.0
-0.1
-0.1
stress
6-Pentyl-2H-pyran-2-one 0.4557668333 mM
-1.5
N.D.
+0.1
+0.3
-0.1
stress
6-Pentyl-2H-pyran-2-one 0.4177863333 mM
-1.3
N.D.
+0.0
-0.0
+0.2
lb no stress control
LB no stress control
-1.1
N.D.
+0.0
+0.3
-0.2
stress
1-octen-3-ol 0.5427293333 mM
-0.9
N.D.
-0.3
+0.2
-0.0
stress
6-Pentyl-2H-pyran-2-one 0.385649 mM
-1.2
N.D.
+0.2
+0.1
+0.0
stress
Thallium(I) acetate 0.0025 mg/ml
-0.2
N.D.
-0.4
-0.6
+0.3
lb no stress control
LB no stress control
-1.3
N.D.
+0.1
+0.3
+0.1
stress
1-octen-3-ol 0.6030326667 mM
-0.9
N.D.
+0.2
+0.1
-0.0
stress
3-octanone 5.310333333 mM
-1.2
N.D.
+0.3
+0.2
+0.0
stress
3-octanone 2.655166667 mM
-0.7
N.D.
+0.1
+0.3
-0.2
r2a control
R2A control for volatile experiments
-0.7
N.D.
+0.3
-0.1
-0.1
r2a-hepes control
R2A-HEPES control for volatile experiments
-0.8
N.D.
-0.1
+0.3
+0.1
stress
6-Pentyl-2H-pyran-2-one 0.385649 mM
-1.0
N.D.
+0.1
+0.4
-0.0
stress
copper (II) chloride 1 mM
+0.0
N.D.
+0.2
-0.8
+0.2
r2a-hepes control
R2A-HEPES control for volatile experiments
-0.8
N.D.
+0.1
+0.2
+0.1
stress
6-Pentyl-2H-pyran-2-one 0.4177863333 mM
-0.9
N.D.
+0.2
+0.3
+0.1
r2a control
R2A control for volatile experiments
-0.6
N.D.
-0.0
+0.5
+0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-1.0
N.D.
+0.4
+0.2
+0.3
nitrogen source
L-Leucine (N)
-0.4
N.D.
-0.3
+0.5
+0.2
stress
Cisplatin 0.001 mg/ml
+0.9
N.D.
-0.0
-0.4
-0.3
stress
6-Pentyl-2H-pyran-2-one 0.385649 mM
-0.5
N.D.
+0.4
+0.3
+0.0
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.2
N.D.
+0.5
-0.4
+0.2
pH
LB, pH6
+0.9
N.D.
-0.2
+0.3
-0.0
nitrogen source
L-Serine (N)
+0.3
N.D.
+0.3
+0.5
+0.2
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