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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMa0445 and SMa0447 are separated by 430 nucleotides
SMa0447 and SMa0448 are separated by 375 nucleotides
SMa0448 and SMa0450 are separated by 549 nucleotides
SMa0450 and SMa0453 are separated by 1882 nucleotides
SMa0445: SMa0445 - TRm1a transposase, at 237,705 to 238,097
SMa0445
SMa0447: SMa0447 - hypothetical protein, at 238,528 to 239,649
SMa0447
SMa0448: SMa0448 - hypothetical protein, at 240,025 to 240,435
SMa0448
SMa0450: SMa0450 - hypothetical protein, at 240,985 to 241,272
SMa0450
SMa0453: SMa0453 - hypothetical protein, at 243,155 to 243,562
SMa0453
Group
Condition
SMa0445
SMa0447
SMa0448
SMa0450
SMa0453
nitrogen source
L-Arginine (N)
N.D.
-0.2
-1.1
-1.6
N.D.
stress
nitrate 40 mM
N.D.
-0.0
+0.2
-3.1
N.D.
carbon source
succinate (C)
N.D.
-0.2
-0.9
-1.1
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
N.D.
-0.3
-0.8
-1.0
N.D.
r2a control
R2A control for volatile experiments
N.D.
-0.4
-0.5
-0.9
N.D.
stress
Chlorite 0.1 mM
N.D.
-0.0
-1.0
-0.7
N.D.
stress
Paraquat dichloride 0.3 mg/ml
N.D.
-0.0
-1.2
-0.5
N.D.
stress
A22 0.02 mg/ml
N.D.
+0.1
-0.6
-1.0
N.D.
carbon source
methyl 3-keto-a-D-glucopyranoside (C)
N.D.
+0.0
-0.4
-1.0
N.D.
r2a control
R2A control for volatile experiments
N.D.
-0.1
-1.5
+0.8
N.D.
pH
LB, pH6
N.D.
-0.0
+0.6
-1.4
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
-0.2
+0.6
-1.2
N.D.
carbon source
Fumarate (C)
N.D.
+0.0
+0.4
-1.1
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
-0.0
+0.6
-1.1
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
+0.2
+1.0
-1.7
N.D.
dmso control
DMSO control
N.D.
-0.2
-0.6
+0.6
N.D.
stress
6-Pentyl-2H-pyran-2-one 0.4177863333 mM
N.D.
-0.2
-0.5
+0.7
N.D.
nitrogen source
L-Histidine (N)
N.D.
-0.1
-0.5
+0.8
N.D.
carbon source
D-Arabinose (C)
N.D.
-0.2
+0.4
+1.0
N.D.
stress
3-octanone 5.310333333 mM
N.D.
-0.1
+0.5
+0.8
N.D.
carbon source
D-Glucose (C)
N.D.
-0.2
+0.6
+0.9
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
-0.4
+0.6
+1.1
N.D.
stress
perchlorate 10 mM
N.D.
-0.1
+1.0
+0.5
N.D.
lb
LB
N.D.
+0.1
+0.8
+0.5
N.D.
carbon source
L-Lactate (C)
N.D.
-0.0
+0.3
+1.2
N.D.
nitrogen source
NAG (N)
N.D.
+0.0
+0.8
+0.7
N.D.
carbon source
D-Sorbitol (C)
N.D.
-0.0
+0.8
+0.7
N.D.
stress
Cisplatin 0.0005 mg/ml
N.D.
-0.0
+0.8
+0.8
N.D.
r2a control
R2A control
N.D.
+0.2
+0.5
+0.9
N.D.
nitrogen source
L-Asparagine (N)
N.D.
+0.1
+0.4
+1.8
N.D.
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