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Cofit
Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMa0429 and SMa0431 overlap by 8 nucleotides
SMa0431 and SMa0433 are separated by 530 nucleotides
SMa0433 and SMa0436 are separated by 217 nucleotides
SMa0436 and SMa5022 are separated by 1384 nucleotides
SMa0429: SMa0429 - hypothetical protein, at 231,427 to 232,443
SMa0429
SMa0431: SMa0431 - hypothetical protein, at 232,436 to 233,029
SMa0431
SMa0433: SMa0433 - hypothetical protein, at 233,560 to 234,030
SMa0433
SMa0436: SMa0436 - hypothetical protein, at 234,248 to 234,631
SMa0436
SMa5022: SMa5022 - hypothetical protein, at 236,016 to 236,381
SMa5022
Group
Condition
SMa0429
SMa0431
SMa0433
SMa0436
SMa5022
stress
3-octanone 5.310333333 mM
+0.0
-3.0
+0.2
+0.0
-0.0
stress
Cisplatin 0.0005 mg/ml
-0.7
-0.4
-0.8
-0.5
-0.0
stress
6-Pentyl-2H-pyran-2-one 0.4177863333 mM
-0.0
-1.6
-0.6
+0.1
-0.1
stress
Polymyxin B sulfate 0.00005 mg/ml
+0.1
-2.1
-0.0
+0.0
-0.0
stress
6-Pentyl-2H-pyran-2-one 0.385649 mM
+0.3
-1.5
-0.8
-0.1
+0.0
stress
3-octanone 5.310333333 mM
-0.1
-1.7
-0.1
-0.0
+0.0
stress
3-octanone 5.310333333 mM
-0.2
-1.3
-0.1
-0.1
-0.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-1.0
+0.2
-0.0
-0.1
-0.9
r2a-hepes control
R2A-HEPES control for volatile experiments
-0.2
-1.3
+0.2
-0.2
-0.2
nitrogen source
Cytosine (N)
+0.3
-0.7
-1.0
+0.1
-0.4
stress
Paraquat dichloride 0.2 mg/ml
+0.0
-1.3
-0.1
-0.0
-0.2
volatiles
R2A-HEPES with volatiles from Trichoderma atroviridae IMI
+0.2
-1.4
-0.1
-0.1
-0.3
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.4
-1.2
-0.1
+0.0
+0.1
stress
1-octen-3-ol 0.4933903333 mM
+0.1
-1.3
-0.2
-0.0
-0.2
stress
1-octen-3-ol 0.5427293333 mM
+0.5
-1.5
-0.4
-0.2
-0.0
dmso control
DMSO control
+0.3
-1.6
-0.2
+0.0
-0.1
stress
6-Pentyl-2H-pyran-2-one 0.4177863333 mM
+0.3
-0.9
-0.2
-0.1
-0.4
stress
1-octen-3-ol 0.6030326667 mM
+0.3
-1.1
-0.2
+0.0
-0.3
carbon source
methyl-beta-D-xylopyranoside (C)
-0.3
-1.0
+0.3
-0.2
+0.0
nitrogen source
L-Arginine (N)
-0.8
-0.3
+0.7
-0.5
-0.2
stress
6-Pentyl-2H-pyran-2-one 0.4177863333 mM
+0.3
-1.4
+0.0
+0.1
+0.0
nitrogen source
L-Serine (N)
+0.5
-0.7
-0.4
+0.1
-0.2
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
-1.0
-0.3
+0.1
+0.2
+0.3
stress
Cisplatin 0.001 mg/ml
+0.3
+0.3
-0.8
-0.0
-0.3
nutrient
Min media with glucose
+0.0
-1.1
+0.3
+0.2
+0.2
stress
perchlorate 10 mM
-0.3
+0.6
-0.9
+0.5
+0.0
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.5
+0.7
+0.6
-0.1
-0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.2
+1.1
+0.7
-0.4
-0.4
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.1
+1.3
-0.1
+0.2
-0.5
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.7
+1.5
+1.1
-0.0
-0.4
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