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Cofit
Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMa5016 and SMa0279 are separated by 310 nucleotides
SMa0279 and SMa0280 are separated by 145 nucleotides
SMa0280 and SMa0281 are separated by 54 nucleotides
SMa0281 and SMa0285 are separated by 360 nucleotides
SMa5016: SMa5016 - hypothetical protein, at 156,190 to 156,489
SMa5016
SMa0279: SMa0279 - hypothetical protein, at 156,800 to 157,411
SMa0279
SMa0280: SMa0280 - hypothetical protein, at 157,557 to 158,345
SMa0280
SMa0281: SMa0281 - MerR family transcriptional regulator, at 158,400 to 158,804
SMa0281
SMa0285: SMa0285 - hypothetical protein, at 159,165 to 159,389
SMa0285
Group
Condition
SMa5016
SMa0279
SMa0280
SMa0281
SMa0285
r2a control
R2A control for volatile experiments
-0.3
-0.1
-0.3
-0.8
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
+0.4
-0.6
+0.1
-1.2
N.D.
r2a control
R2A control for volatile experiments
-0.1
-0.5
+0.1
-0.9
N.D.
stress
3-octanone 5.310333333 mM
+0.1
-0.8
+0.0
-0.6
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.2
-0.6
+0.0
-0.4
N.D.
lb no stress control
LB no stress control
-0.3
-0.8
-0.2
+0.1
N.D.
carbon source
NAG (C)
-0.2
+0.2
-0.3
-0.8
N.D.
stress
6-Pentyl-2H-pyran-2-one 0.385649 mM
-0.4
+0.5
-0.3
-0.6
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.2
-1.4
-0.5
+1.2
N.D.
stress
Paraquat dichloride 0.2 mg/ml
-0.4
-0.7
+0.2
+0.0
N.D.
r2a-hepes control
R2A-HEPES control for volatile experiments
-0.3
+0.2
-0.1
-0.6
N.D.
carbon source
D-Mannose (C)
-0.4
-0.6
+0.1
+0.2
N.D.
stress
1-octen-3-ol 0.5427293333 mM
+0.2
-0.2
-0.1
-0.6
N.D.
stress
Nickel (II) chloride 1 mM
+0.5
-0.5
-0.2
-0.3
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.5
-0.3
-0.2
+0.6
N.D.
r2a-hepes control
R2A-HEPES control for volatile experiments
-0.1
+0.4
+0.2
-0.9
N.D.
r2a-hepes control
R2A-HEPES control for volatile experiments
-0.2
+0.5
-0.1
-0.5
N.D.
nitrogen source
Cytosine (N)
+0.4
-0.2
+0.1
-0.5
N.D.
stress
Thallium(I) acetate 0.0025 mg/ml
-0.2
-0.2
+0.6
-0.2
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.5
+0.1
-0.2
+0.7
N.D.
nitrogen source
Uridine (N)
-0.2
+0.5
+0.3
-0.4
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.3
+0.1
-0.2
+0.7
N.D.
stress
Polymyxin B sulfate 0.00005 mg/ml
+0.2
+0.4
+0.3
-0.5
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.2
+0.1
-0.5
+0.8
N.D.
stress
nitrate 40 mM
-0.1
+0.6
+0.3
-0.2
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.3
+0.4
-0.3
+0.3
N.D.
stress
Aluminum chloride
-0.2
+0.5
-0.1
+0.4
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.1
+0.1
-0.2
+1.1
N.D.
nutrient
Min media with glucose
-0.0
+0.8
-0.3
+0.5
N.D.
nitrogen source
L-Glutamine (N)
+0.4
+0.2
+0.3
+0.3
N.D.
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