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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMa0259 and SMa0260 are separated by 15 nucleotides
SMa0260 and SMa0263 are separated by 16 nucleotides
SMa0263 and SMa0265 are separated by 21 nucleotides
SMa0265 and SMa0267 are separated by 94 nucleotides
SMa0259: SMa0259 - hypothetical protein, at 145,822 to 146,667
SMa0259
SMa0260: SMa0260 - GabD3 succinate-semialdehyde dehdyrogenase, at 146,683 to 148,146
SMa0260
SMa0263: SMa0263 - alcohol dehydrogenase, at 148,163 to 149,362
SMa0263
SMa0265: SMa0265 - dehydrogenase, at 149,384 to 150,388
SMa0265
SMa0267: SMa0267 - GntR family transcriptional regulator, at 150,483 to 151,175
SMa0267
Group
Condition
SMa0259
SMa0260
SMa0263
SMa0265
SMa0267
stress
3-octanone 5.310333333 mM
-0.1
-0.1
-0.3
-0.8
-0.5
stress
Paraquat dichloride 0.2 mg/ml
-0.3
-0.1
-0.7
-1.0
+0.4
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.0
-0.2
-0.3
-0.8
-0.2
carbon source
methyl 3-keto-a-D-glucopyranoside (C)
-0.4
-0.1
+0.2
-0.7
-0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
-0.8
-0.5
+0.1
+0.0
-0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.4
-0.2
-0.7
-0.3
+0.4
r2a-hepes control
R2A-HEPES control for volatile experiments
+0.1
-0.1
+0.4
-0.6
-0.9
r2a control
R2A control for volatile experiments
+0.0
+0.1
+0.1
-0.4
-0.9
lb
LB
-0.2
-0.1
-0.3
-0.7
+0.5
stress
Sisomicin 0.004 mg/ml
-0.4
-0.1
-0.2
-0.6
+0.5
volatiles
R2A-HEPES with volatiles from Trichoderma atroviridae IMI
+0.3
-0.2
+0.2
-0.3
-0.7
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
+0.2
-0.2
+0.4
-1.0
-0.2
stress
3-octanone 0.456 mM
+0.2
-0.3
+0.2
-0.2
-0.7
stress
Polymyxin B sulfate 0.00005 mg/ml
+0.1
-0.0
+0.1
-1.2
+0.4
nitrogen source
nitrate (N)
+0.1
-0.2
+0.3
-0.9
-0.0
stress
Thallium(I) acetate 0.001 mg/ml
-0.4
+0.1
+0.0
-0.8
+0.6
r2a-hepes control
R2A-HEPES control for volatile experiments
+0.3
-0.1
+0.0
+0.5
-1.0
stress
Paraquat dichloride 0.2 mg/ml
-0.0
-0.1
+0.4
-0.8
+0.5
stress
Nickel (II) chloride 1 mM
+0.1
+0.1
+0.0
-0.8
+0.6
stress
Aluminum chloride
+0.1
-0.1
+0.3
-0.8
+0.5
stress
perchlorate 10 mM
+0.4
+0.1
+0.7
-1.2
+0.3
stress
Thallium(I) acetate 0.0025 mg/ml
-0.1
+0.0
-0.6
-0.2
+1.0
nitrogen source
L-Serine (N)
-0.0
-0.3
+0.3
+0.6
-0.3
stress
D-Cycloserine 0.05 mg/ml
+0.1
+0.1
+0.1
-0.6
+0.7
dmso control
DMSO control
+0.2
+0.1
+0.3
+0.5
-0.5
nitrogen source
L-Asparagine (N)
-0.2
-0.3
+0.4
+0.5
+0.3
stress
nitrate 40 mM
+0.0
-0.3
+0.7
-0.1
+0.4
stress
Paraquat dichloride 0.3 mg/ml
+0.3
-0.3
+0.3
-0.2
+0.8
nitrogen source
L-Histidine (N)
+0.2
-0.1
-0.1
+1.0
-0.1
nutrient
L-Histidine
+0.2
+0.2
+0.2
+1.0
+0.5
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