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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMa0209 and SMa0210 are separated by 94 nucleotides
SMa0210 and SMa0211 are separated by 142 nucleotides
SMa0211 and SMa0214 are separated by 217 nucleotides
SMa0214 and SMa0216 are separated by 31 nucleotides
SMa0209: SMa0209 - hypothetical protein, at 114,669 to 115,757
SMa0209
SMa0210: SMa0210 - hypothetical protein, at 115,852 to 116,118
SMa0210
SMa0211: SMa0211 - hypothetical protein, at 116,261 to 116,455
SMa0211
SMa0214: SMa0214 - 5-keto-4-deoxyuronate isomerase, at 116,673 to 117,515
SMa0214
SMa0216: SMa0216 - ABC transporter ATP-binding protein, at 117,547 to 118,287
SMa0216
Group
Condition
SMa0209
SMa0210
SMa0211
SMa0214
SMa0216
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
-0.0
-0.4
-2.9
-0.1
-0.5
stress
Polymyxin B sulfate 0.00005 mg/ml
+0.0
-1.3
-2.3
-0.1
+0.1
nitrogen source
NAG (N)
-0.0
+0.1
-2.9
+0.0
-0.4
nitrogen source
L-Asparagine (N)
-0.0
-0.3
-3.0
+0.2
-0.1
nitrogen source
nitrate (N)
-0.1
-0.1
-2.2
-0.2
-0.2
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
+0.0
+0.3
-2.3
+0.1
-0.3
stress
Nickel (II) chloride 1 mM
+0.1
-0.3
-1.3
-0.5
+0.1
nitrogen source
L-Glutamine (N)
-0.0
-0.3
-1.2
-0.2
-0.2
nitrogen source
L-Leucine (N)
+0.1
-0.2
-0.9
-0.3
-0.3
lb
LB
+0.1
-0.1
-1.4
+0.0
-0.1
carbon source
Lactitol (C)
-0.0
+0.2
-1.7
+0.1
+0.0
carbon source
D-Raffinose (C)
-0.1
-0.1
-1.5
+0.1
+0.2
carbon source
Methyl beta-D-glucopyranoside (C)
-0.0
-0.1
-1.4
+0.2
-0.1
pH
LB, pH6
-0.2
+0.4
-1.3
-0.1
-0.3
carbon source
L-Alanine (C)
+0.1
-0.2
-0.9
-0.1
-0.3
carbon source
acetate (C)
+0.0
+0.1
-1.6
+0.1
+0.1
dmso control
DMSO control
-0.1
+0.2
-1.2
-0.2
-0.0
stress
Cisplatin 0.001 mg/ml
-0.3
-0.0
-0.7
-0.5
+0.2
stress
Chloride 200 mM
-0.1
+0.1
-1.4
+0.2
-0.0
carbon source
Xylobiose (C)
-0.1
+0.2
-1.2
+0.1
-0.1
nutrient
Min media with glucose
+0.0
+0.1
-1.3
+0.0
+0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.3
+0.3
-1.4
-0.0
-0.1
nitrogen source
L-Arginine (N)
+0.1
-0.2
-1.2
+0.5
+0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.1
+0.9
-1.1
-0.2
+0.1
r2a control
R2A control for volatile experiments
+0.0
+0.2
+1.1
-0.0
-0.3
volatiles
R2A-HEPES with volatiles from Trichoderma atroviridae IMI
-0.2
-0.1
+1.1
-0.1
+0.3
stress
Thallium(I) acetate 0.001 mg/ml
-0.2
+0.7
+0.3
+0.0
+0.4
volatiles
R2A-HEPES with volatiles from Trichoderma atroviridae IMI
+0.0
+0.2
+1.3
+0.2
-0.2
carbon source
D-Glucose (C)
-0.0
+0.2
+1.2
-0.0
+0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.3
-0.0
+1.5
+0.0
+0.4
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