Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMa0160 and SMa0162 are separated by 184 nucleotidesSMa0162 and SMa0163 overlap by 197 nucleotidesSMa0163 and SMa0164 overlap by 4 nucleotidesSMa0164 and SMa0166 are separated by 21 nucleotides SMa0160: SMa0160 - GntR family transcriptional regulator, at 88,416 to 89,090 SMa0160 SMa0162: SMa0162 - hypothetical protein, at 89,275 to 89,520 SMa0162 SMa0163: SMa0163 - PilQ2 pilus assembly protein, at 89,324 to 90,724 SMa0163 SMa0164: SMa0164 - hypothetical protein, at 90,721 to 91,017 SMa0164 SMa0166: SMa0166 - hypothetical protein, at 91,039 to 91,569 SMa0166
Group Condition SMa0160 SMa0162 SMa0163 SMa0164 SMa0166
r2a control R2A control for volatile experiments -0.5 N.D. -0.1 -0.3 -0.8
stress perchlorate 10 mM -0.1 N.D. +0.2 -0.6 -0.8
carbon source Lactitol (C) -0.4 N.D. -0.1 +0.1 -0.7
nitrogen source Cytosine (N) -0.3 N.D. -0.2 -0.9 +0.5
lb no stress control LB no stress control -0.3 N.D. -0.2 +0.3 -0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.2 N.D. +0.1 -0.8 -0.2
stress Sisomicin 0.004 mg/ml +0.2 N.D. +0.0 -0.6 -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 N.D. +0.1 -1.1 -0.2
r2a control R2A control for volatile experiments -0.4 N.D. -0.0 +0.5 -0.5
carbon source methyl-beta-D-xylopyranoside (C) -0.2 N.D. +0.1 -0.8 +0.3
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI -0.7 N.D. -0.1 +0.4 -0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.3 N.D. +0.1 -0.9 +0.1
carbon source palatinose (C) -0.1 N.D. +0.0 -0.7 +0.4
nitrogen source Gelatin (N) +0.2 N.D. -0.1 -0.8 +0.5
stress Paraquat dichloride 0.2 mg/ml +0.5 N.D. +0.2 -0.9 +0.0
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.2 N.D. -0.2 -0.6 +0.4
r2a control R2A control for volatile experiments -0.7 N.D. +0.1 +0.3 +0.1
stress Polymyxin B sulfate 0.00005 mg/ml -0.2 N.D. +0.4 -0.5 +0.2
nitrogen source L-Arginine (N) +0.1 N.D. -0.0 -0.7 +0.6
stress copper (II) chloride 1 mM -0.7 N.D. +0.2 +0.5 +0.0
stress nitrate 40 mM -0.1 N.D. -0.0 +1.1 -0.8
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.1 N.D. +0.1 -0.7 +0.9
r2a-hepes control R2A-HEPES control for volatile experiments -0.3 N.D. -0.2 +0.4 +0.5
r2a-hepes control R2A-HEPES control for volatile experiments -0.4 N.D. -0.1 +0.9 +0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.0 N.D. +0.1 -0.4 +0.8
nutrient Min media with glucose +0.1 N.D. -0.0 -0.4 +0.9
pH LB, pH6 +0.5 N.D. +0.3 +0.4 -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 N.D. +0.3 -0.4 +0.5
nitrogen source L-Glutamine (N) +0.1 N.D. -0.1 +0.5 +0.8
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 N.D. +0.1 +0.3 +1.0
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