Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMa0125 and SMa0126 are separated by 613 nucleotidesSMa0126 and SMa0128 are separated by 120 nucleotidesSMa0128 and SMa0130 are separated by 85 nucleotidesSMa0130 and SMa0132 overlap by 1 nucleotides SMa0125: SMa0125 - co-chaperonin GroES, at 67,874 to 68,191 SMa0125 SMa0126: SMa0126 - CspA8 Cold shock family protein, at 68,805 to 69,014 SMa0126 SMa0128: SMa0128 - hypothetical protein, at 69,135 to 69,515 SMa0128 SMa0130: SMa0130 - fatty acid desaturase, at 69,601 to 70,668 SMa0130 SMa0132: SMa0132 - hypothetical protein, at 70,668 to 70,955 SMa0132
Group Condition SMa0125 SMa0126 SMa0128 SMa0130 SMa0132
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.2 -2.1 N.D. +0.1 -1.4
nitrogen source nitrate (N) +0.4 -1.7 N.D. -0.2 -0.4
stress Chlorite 0.1 mM -1.1 +1.0 N.D. +0.1 -1.9
nitrogen source Gly-DL-Asp (N) +0.1 -1.1 N.D. -0.5 -0.4
nitrogen source L-Histidine (N) +0.0 -1.1 N.D. -0.8 +0.0
carbon source palatinose (C) +0.1 -1.2 N.D. -0.2 -0.2
pH LB, pH6 +0.1 +0.2 N.D. -0.3 -1.4
nitrogen source L-Leucine (N) +0.6 -0.7 N.D. -0.2 -0.5
stress Cisplatin 0.001 mg/ml +0.4 -0.2 N.D. -0.4 -0.7
carbon source Myristic (C) +0.2 -1.0 N.D. -0.3 +0.3
stress Thallium(I) acetate 0.001 mg/ml -0.2 +0.9 N.D. +0.2 -1.6
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 +0.9 N.D. -0.4 -0.4
carbon source D-Glucose (C) +0.1 +0.7 N.D. -0.6 -0.5
carbon source Methyl beta-D-glucopyranoside (C) -0.4 +1.1 N.D. -0.1 -0.7
r2a control R2A control for volatile experiments -0.0 -1.2 N.D. +0.1 +1.0
stress Nickel (II) chloride 1 mM -0.6 +1.0 N.D. -0.5 +0.2
carbon source L-Alanine (C) +0.2 +0.8 N.D. -0.3 -0.6
pH LB, pH8 -0.2 +1.1 N.D. -0.2 -0.5
stress copper (II) chloride 1 mM -1.1 +1.5 N.D. +0.0 -0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.2 +0.8 N.D. -0.6 -0.1
carbon source methyl-beta-D-xylopyranoside (C) -0.2 +1.2 N.D. -0.3 -0.4
carbon source succinate (C) +0.1 +0.8 N.D. -0.5 +0.3
nitrogen source L-Arginine (N) -0.3 +0.9 N.D. -0.8 +0.8
carbon source Protocatechuic Acid (C) +0.5 +0.9 N.D. -0.4 -0.1
stress D-Cycloserine 0.05 mg/ml +0.5 +0.9 N.D. -0.2 -0.2
lb LB +0.3 +0.9 N.D. -0.3 +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 +1.5 N.D. +0.1 +0.3
carbon source Xylobiose (C) +0.2 +1.1 N.D. -0.1 +0.4
r2a-hepes control R2A-HEPES control for volatile experiments +0.2 +0.7 N.D. -0.2 +1.0
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.1 +1.3 N.D. +0.1 +0.5
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