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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMa0110 and SMa5001 are separated by 41 nucleotides
SMa5001 and SMa0112 are separated by 190 nucleotides
SMa0112 and SMa0113 are separated by 468 nucleotides
SMa0113 and SMa0114 are separated by 27 nucleotides
SMa0110: SMa0110 - ABC transporter ATP-binding protein, at 57,294 to 58,256
SMa0110
SMa5001: SMa5001 - hypothetical protein, at 58,298 to 58,612
SMa5001
SMa0112: SMa0112 - hypothetical protein, at 58,803 to 59,234
SMa0112
SMa0113: SMa0113 - Sensor histidine kinase, at 59,703 to 62,264
SMa0113
SMa0114: SMa0114 - two-component response regulator, at 62,292 to 62,654
SMa0114
Group
Condition
SMa0110
SMa5001
SMa0112
SMa0113
SMa0114
nitrogen source
L-Arginine (N)
-0.4
-1.1
-0.4
-0.1
-0.3
stress
Polymyxin B sulfate 0.00005 mg/ml
-0.7
-0.6
-1.2
+0.4
+0.4
stress
Paraquat dichloride 0.3 mg/ml
-0.0
-0.6
-1.5
+0.4
+0.3
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.1
+0.2
-1.5
+0.3
-0.3
nitrogen source
L-Asparagine (N)
+0.4
+0.3
-2.4
+0.1
+0.2
lb
LB
-0.0
-0.5
-1.3
+0.4
+0.4
stress
D-Cycloserine 0.05 mg/ml
-0.1
-0.2
-1.6
+0.4
+0.4
nitrogen source
Uridine (N)
-0.5
-0.2
-1.2
+0.4
+0.4
stress
Paraquat dichloride 0.2 mg/ml
-0.4
-0.2
-1.2
+0.3
+0.4
stress
perchlorate 10 mM
-0.5
-0.4
-1.0
+0.4
+0.4
nitrogen source
Gly-DL-Asp (N)
-0.3
-0.2
-1.1
+0.1
+0.6
stress
Thallium(I) acetate 0.001 mg/ml
-0.2
-0.2
-1.2
+0.4
+0.3
pH
LB, pH8
-0.5
-0.4
-0.6
+0.5
+0.2
stress
Thallium(I) acetate 0.0025 mg/ml
+0.1
-0.0
-1.5
+0.5
+0.2
nutrient
L-Histidine
-0.5
+0.1
-0.9
+0.2
+0.4
nitrogen source
D-Glucosamine Hydrochloride (N)
-0.4
-0.1
-1.3
+0.4
+0.7
stress
nitrate 40 mM
-0.1
-0.5
-0.7
+0.6
+0.3
nitrogen source
nitrate (N)
-0.7
+0.0
-1.2
+0.9
+0.7
carbon source
D-Glucosamine Hydrochloride (C)
-0.4
-0.0
-1.4
+0.8
+0.7
nitrogen source
L-Leucine (N)
+0.5
-0.0
-1.3
+0.3
+0.3
carbon source
L-Histidine (C)
-0.3
-0.1
-1.1
+0.9
+0.7
stress
Nickel (II) chloride 1 mM
-0.3
-0.0
-0.6
+1.0
+0.3
pH
LB, pH6
+0.1
-0.3
-0.5
+0.8
+0.4
carbon source
Uridine (C)
+0.2
-0.1
-0.7
+1.1
+0.6
carbon source
L-Alanine (C)
-0.3
+0.4
-0.3
+1.1
+0.6
carbon source
Myristic (C)
-0.1
-0.0
-1.3
+1.9
+1.4
carbon source
L-Alanine (C)
+0.1
+0.1
-0.2
+1.2
+0.7
carbon source
pipercolic (C)
-0.1
+0.1
+0.2
+1.4
+0.8
carbon source
pipercolic (C)
+0.3
+0.1
+0.1
+1.5
+0.8
carbon source
Myristic (C)
+0.1
-0.1
-0.6
+1.9
+1.4
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