Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMa0105 and SMa0106 are separated by 5 nucleotidesSMa0106 and SMa0108 overlap by 4 nucleotidesSMa0108 and SMa0110 overlap by 4 nucleotidesSMa0110 and SMa5001 are separated by 41 nucleotides SMa0105: SMa0105 - ABC transporter permease, at 54,624 to 55,559 SMa0105 SMa0106: SMa0106 - ABC transporter permease, at 55,565 to 56,386 SMa0106 SMa0108: SMa0108 - ABC transporter ATP-binding protein, at 56,383 to 57,297 SMa0108 SMa0110: SMa0110 - ABC transporter ATP-binding protein, at 57,294 to 58,256 SMa0110 SMa5001: SMa5001 - hypothetical protein, at 58,298 to 58,612 SMa5001
Group Condition SMa0105 SMa0106 SMa0108 SMa0110 SMa5001
stress Cisplatin 0.0005 mg/ml -0.3 -2.2 -0.5 -0.2 +0.0
stress Polymyxin B sulfate 0.00005 mg/ml -0.5 -0.2 -0.2 -0.7 -0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 -1.4 +0.2 -0.7 -0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -0.7 -0.2 -0.4 +0.0
pH LB, pH7 -0.3 -0.4 -0.0 -0.5 -0.5
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI -0.1 -0.4 -0.2 -0.4 -0.5
stress Paraquat dichloride 0.3 mg/ml -0.1 -0.8 -0.1 -0.0 -0.6
stress Sisomicin 0.004 mg/ml -0.0 -0.9 -0.1 -0.2 -0.2
pH LB, pH8 -0.3 -0.1 -0.2 -0.5 -0.4
stress copper (II) chloride 1 mM -0.1 -0.3 -0.1 -0.5 -0.4
stress perchlorate 10 mM +0.3 -1.0 +0.5 -0.5 -0.4
stress nitrate 40 mM -0.2 +0.2 -0.3 -0.1 -0.5
carbon source D-Glucose (C) -0.2 +0.1 -0.3 +0.2 -0.5
nitrogen source L-Arginine (N) +0.4 +0.5 -0.1 -0.4 -1.1
lb LB -0.4 +0.2 +0.2 -0.0 -0.5
stress Nickel (II) chloride 0.5 mM -0.3 -0.3 +0.1 +0.3 -0.4
stress Nickel (II) chloride 1 mM +0.1 -0.5 +0.3 -0.3 -0.0
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -0.3 +0.3 -0.1 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.8 +0.2 -0.1 +0.3 +0.1
carbon source D-Mannose (C) +0.2 +0.3 +0.1 -0.5 -0.2
carbon source Protocatechuic Acid (C) +0.3 -0.6 +0.1 +0.4 -0.2
temperature LB, 30C -0.3 +0.6 +0.1 +0.1 -0.4
carbon source methyl 3-keto-a-D-glucopyranoside (C) -0.3 +0.2 +0.3 -0.4 +0.3
nitrogen source Cytosine (N) +0.4 +0.4 -0.1 -0.7 +0.2
nitrogen source D-Glucosamine Hydrochloride (N) +0.4 +0.3 +0.2 -0.4 -0.1
r2a control R2A control for volatile experiments +0.3 -0.4 +0.1 +0.4 +0.0
r2a control R2A control for volatile experiments +0.3 -0.1 +0.2 +0.5 -0.3
stress 3-octanone 0.456 mM +0.1 -0.1 -0.3 +0.6 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.1 +0.8 +0.3 -0.0 -0.2
nitrogen source L-Asparagine (N) -0.2 +0.8 -0.4 +0.4 +0.3
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