Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMa0101 and SMa0104 are separated by 56 nucleotidesSMa0104 and SMa0105 are separated by 87 nucleotidesSMa0105 and SMa0106 are separated by 5 nucleotidesSMa0106 and SMa0108 overlap by 4 nucleotides SMa0101: SMa0101 - amidohydrolase, at 51,262 to 52,887 SMa0101 SMa0104: SMa0104 - ABC transporter substrate-binding protein, at 52,944 to 54,536 SMa0104 SMa0105: SMa0105 - ABC transporter permease, at 54,624 to 55,559 SMa0105 SMa0106: SMa0106 - ABC transporter permease, at 55,565 to 56,386 SMa0106 SMa0108: SMa0108 - ABC transporter ATP-binding protein, at 56,383 to 57,297 SMa0108
Group Condition SMa0101 SMa0104 SMa0105 SMa0106 SMa0108
stress Cisplatin 0.0005 mg/ml -0.3 -0.3 -0.3 -2.2 -0.5
carbon source L-Lysine (C) -0.6 -0.3 -0.1 -0.5 -0.4
stress Polymyxin B sulfate 0.00005 mg/ml -0.5 -0.2 -0.5 -0.2 -0.2
carbon source L-Lysine (C) -0.5 -0.3 -0.5 -0.2 -0.2
carbon source L-Lysine (C) -0.5 -0.3 -0.1 -0.3 -0.2
stress Sisomicin 0.004 mg/ml +0.1 -0.2 -0.0 -0.9 -0.1
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI -0.2 -0.2 -0.1 -0.4 -0.2
stress Paraquat dichloride 0.3 mg/ml -0.1 +0.0 -0.1 -0.8 -0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.1 +0.2 -0.5 -0.7 -0.2
pH LB, pH7 -0.1 -0.1 +0.1 -0.6 -0.2
carbon source D-Glucose (C) -0.2 -0.2 -0.2 +0.1 -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.1 -0.0 -0.8 +0.2 -0.1
stress Thallium(I) acetate 0.0025 mg/ml -0.2 -0.1 +0.3 -0.4 -0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.1 -0.0 -0.5 -0.3 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.1 -0.0 +0.7 -1.4 +0.2
carbon source Protocatechuic Acid (C) -0.2 -0.1 +0.3 -0.6 +0.1
carbon source Maltitol (C) -0.3 +0.0 -0.5 +0.3 +0.1
stress perchlorate 10 mM -0.1 -0.0 +0.3 -1.0 +0.5
carbon source palatinose (C) -0.2 +0.0 -0.4 +0.5 -0.1
stress Nickel (II) chloride 1 mM -0.1 +0.1 +0.1 -0.5 +0.3
r2a-hepes control R2A-HEPES control for volatile experiments +0.0 +0.1 +0.2 -0.6 +0.3
temperature LB, 30C +0.0 -0.1 -0.3 +0.6 +0.1
nitrogen source L-Asparagine (N) +0.1 +0.0 -0.2 +0.8 -0.4
r2a control R2A control for volatile experiments +0.3 +0.0 +0.3 -0.4 +0.1
nitrogen source L-Arginine (N) -0.0 -0.3 +0.4 +0.5 -0.1
nitrogen source Cytosine (N) -0.1 -0.1 +0.4 +0.4 -0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.2 +0.0 +0.1 +0.6 +0.2
r2a control R2A control for volatile experiments +0.2 -0.0 +0.4 -0.2 +0.4
nitrogen source D-Glucosamine Hydrochloride (N) -0.0 +0.2 +0.4 +0.3 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.0 -0.1 -0.1 +0.8 +0.3
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