Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMa0095 and SMa0097 are separated by 16 nucleotidesSMa0097 and SMa0101 are separated by 182 nucleotidesSMa0101 and SMa0104 are separated by 56 nucleotidesSMa0104 and SMa0105 are separated by 87 nucleotides SMa0095: SMa0095 - D-aminopeptidase, at 49,084 to 50,121 SMa0095 SMa0097: SMa0097 - LysR family transcriptional regulator, at 50,138 to 51,079 SMa0097 SMa0101: SMa0101 - amidohydrolase, at 51,262 to 52,887 SMa0101 SMa0104: SMa0104 - ABC transporter substrate-binding protein, at 52,944 to 54,536 SMa0104 SMa0105: SMa0105 - ABC transporter permease, at 54,624 to 55,559 SMa0105
Group Condition SMa0095 SMa0097 SMa0101 SMa0104 SMa0105
stress nitrate 40 mM -2.5 +0.1 -0.0 -0.2 -0.2
carbon source L-Lysine (C) -0.6 -0.1 -0.5 -0.3 -0.5
stress Cisplatin 0.0005 mg/ml -0.4 -0.3 -0.3 -0.3 -0.3
nitrogen source Gly-DL-Asp (N) -0.8 -0.7 +0.0 +0.0 -0.0
nitrogen source L-Arginine (N) -1.4 -0.1 -0.0 -0.3 +0.4
carbon source methyl 3-keto-a-D-glucopyranoside (C) -0.3 -0.5 -0.2 +0.0 -0.3
stress Paraquat dichloride 0.2 mg/ml -0.9 +0.0 -0.2 +0.0 -0.3
stress Aluminum chloride -0.3 -0.3 -0.1 -0.3 -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.1 -0.3 -0.1 -0.0 -0.8
stress Polymyxin B sulfate 0.00005 mg/ml -0.0 +0.1 -0.5 -0.2 -0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8 -0.1 +0.1 +0.2 -0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.7 -0.4 +0.2 +0.0 -0.1
stress Nickel (II) chloride 1 mM -1.0 -0.1 -0.1 +0.1 +0.1
carbon source L-Lysine (C) -0.2 +0.3 -0.6 -0.3 -0.1
nitrogen source Gelatin (N) -1.2 -0.1 +0.1 +0.2 +0.1
carbon source L-Lysine (C) +0.3 -0.1 -0.5 -0.3 -0.1
lb LB -0.6 +0.3 -0.1 +0.1 -0.2
carbon source Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C) +0.2 -0.6 -0.2 -0.1 +0.2
carbon source Protocatechuic Acid (C) -0.5 +0.2 -0.2 -0.1 +0.3
nitrogen source Cytosine (N) -0.6 +0.1 -0.1 -0.1 +0.4
carbon source Maltitol (C) +0.4 +0.0 -0.3 +0.0 -0.5
stress Chlorite 0.1 mM +0.9 -0.3 -0.2 -0.2 -0.3
pH LB, pH6 +0.8 -0.4 -0.0 -0.0 -0.0
carbon source Myristic (C) +0.6 -0.1 -0.2 -0.0 +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 -0.1 -0.1 -0.0 +0.7
pH LB, pH6 +0.7 +0.1 -0.2 -0.1 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.2 -0.1 +0.2 +0.1 -0.5
r2a control R2A control for volatile experiments +0.6 +0.2 +0.2 +0.1 +0.2
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI +0.7 +0.2 +0.1 +0.1 +0.1
r2a control R2A control for volatile experiments +0.8 +0.2 +0.3 +0.0 +0.3
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