Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMa0028 and SMa0031 are separated by 294 nucleotidesSMa0031 and SMa0034 are separated by 16 nucleotidesSMa0034 and SMa0036 are separated by 320 nucleotidesSMa0036 and SMa0039 are separated by 346 nucleotides SMa0028: SMa0028 - selenophosphate synthetase, at 17,865 to 18,914 SMa0028 SMa0031: SMa0031 - hypothetical protein, at 19,209 to 19,436 SMa0031 SMa0034: SMa0034 - protease, at 19,453 to 21,108 SMa0034 SMa0036: SMa0036 - ABC transporter ATP-binding protein, at 21,429 to 23,051 SMa0036 SMa0039: SMa0039 - LysR family transcriptional regulator, at 23,398 to 24,297 SMa0039
Group Condition SMa0028 SMa0031 SMa0034 SMa0036 SMa0039
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 N.D. +0.0 -0.3 -0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.2 N.D. -0.1 -0.2 -0.3
stress copper (II) chloride 1 mM -0.2 N.D. -0.0 -0.4 -0.1
carbon source L-Alanine (C) -0.3 N.D. -0.1 -0.2 +0.1
stress Fusidic 0.0001 mg/ml -0.1 N.D. -0.0 -0.4 +0.1
carbon source methyl 3-keto-a-D-glucopyranoside (C) -0.3 N.D. -0.0 -0.2 +0.1
nitrogen source L-Asparagine (N) -0.5 N.D. +0.2 -0.3 +0.2
stress Cisplatin 0.001 mg/ml -0.1 N.D. +0.1 -0.4 +0.0
r2a control R2A control for volatile experiments +0.0 N.D. -0.2 -0.3 +0.1
nitrogen source L-Leucine (N) -0.1 N.D. +0.2 -0.2 -0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.1 N.D. +0.0 -0.4 -0.1
carbon source methyl-beta-D-xylopyranoside (C) -0.4 N.D. +0.0 +0.1 -0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.2 N.D. +0.1 -0.2 -0.3
nutrient L-Lysine -0.1 N.D. +0.1 -0.3 +0.1
pH LB, pH6 +0.1 N.D. +0.1 -0.3 -0.1
pH LB, pH6 -0.2 N.D. +0.2 -0.1 -0.1
stress Chlorite 0.1 mM +0.2 N.D. -0.2 +0.1 -0.3
stress Sisomicin 0.004 mg/ml +0.2 N.D. +0.1 -0.1 -0.3
nitrogen source nitrate (N) -0.4 N.D. +0.2 +0.0 +0.1
carbon source Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C) -0.3 N.D. +0.1 +0.1 +0.1
nitrogen source Uridine (N) -0.0 N.D. +0.1 -0.2 +0.2
nitrogen source L-Arginine (N) -0.3 N.D. +0.1 +0.2 +0.2
r2a control R2A control for volatile experiments +0.3 N.D. +0.1 -0.1 -0.1
stress perchlorate 10 mM -0.1 N.D. -0.1 +0.0 +0.5
stress Thallium(I) acetate 0.0025 mg/ml +0.3 N.D. +0.2 +0.1 -0.1
r2a control R2A control for volatile experiments +0.3 N.D. +0.1 -0.1 +0.1
stress D-Cycloserine 0.05 mg/ml +0.2 N.D. -0.1 -0.2 +0.5
dmso control DMSO control +0.3 N.D. +0.0 -0.1 +0.3
carbon source L-Malic (C) +0.3 N.D. -0.0 +0.2 +0.1
stress Polymyxin B sulfate 0.00005 mg/ml +0.2 N.D. +0.1 +0.4 +0.1
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