Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSM_b20158 and SM_b20159 are separated by 53 nucleotidesSM_b20159 and SM_b22005 are separated by 678 nucleotidesSM_b22005 and SM_b20161 overlap by 4 nucleotidesSM_b20161 and SM_b20162 are separated by 193 nucleotides SM_b20158: SM_b20158 - ABC transporter substrate-binding protein, at 176,427 to 177,551 _b20158 SM_b20159: SM_b20159 - inositol monophosphatase, at 177,605 to 178,489 _b20159 SM_b22005: SM_b22005 - hypothetical protein, at 179,168 to 179,536 _b22005 SM_b20161: SM_b20161 - hypothetical protein, at 179,533 to 179,883 _b20161 SM_b20162: SM_b20162 - transcriptional regulator, at 180,077 to 180,766 _b20162
Group Condition SM_b20158 SM_b20159 SM_b22005 SM_b20161 SM_b20162
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.1 +0.3 -2.9 -0.4 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -0.2 -1.2 -0.4 -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.0 -0.8 -1.1 +0.2 -0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.1 -0.3 -1.0 -0.2 -0.3
stress 3-octanone 5.310333333 mM -0.0 -0.1 -1.0 +0.0 -0.3
lb LB -0.0 -0.2 -1.0 +0.0 -0.1
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI -0.0 +0.1 -1.2 -0.2 +0.0
lb LB -0.1 -0.0 -1.4 +0.2 +0.3
carbon source Uridine (C) +0.1 -0.2 -0.6 -0.4 +0.2
r2a-hepes control R2A-HEPES control for volatile experiments +0.1 +0.2 -0.7 -0.1 -0.2
carbon source Protocatechuic Acid (C) +0.1 +0.4 -0.9 -0.1 +0.1
r2a control R2A control for volatile experiments +0.1 +0.3 -0.6 +0.4 -0.5
stress Cisplatin 0.001 mg/ml -0.2 -0.2 -0.5 +0.4 +0.2
stress Paraquat dichloride 0.2 mg/ml -0.0 -0.1 -0.7 -0.1 +0.6
nitrogen source nitrate (N) -0.2 -0.3 +0.5 -0.3 +0.1
carbon source Beta-Lactose (C) +0.2 +0.1 -0.8 +0.3 +0.1
stress 1-octen-3-ol 0.5427293333 mM -0.1 +0.0 +0.8 -0.3 -0.3
stress 3-octanone 0.456 mM +0.2 -0.3 +0.4 +0.5 -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.2 -0.4 +0.7 +0.2 -0.4
nitrogen source L-Serine (N) +0.1 -0.5 +0.2 +0.4 +0.3
carbon source D-Glucose (C) +0.1 -0.0 +0.9 -0.4 -0.1
nitrogen source L-Asparagine (N) +0.0 -0.6 +0.9 +0.5 -0.1
stress Chlorite 0.1 mM -0.4 -0.1 +0.9 +0.2 +0.1
stress Paraquat dichloride 0.3 mg/ml +0.2 +0.2 +0.5 -0.2 +0.4
nitrogen source Gelatin (N) +0.0 -0.2 +0.8 +0.3 +0.1
stress Sisomicin 0.004 mg/ml -0.2 -0.0 +0.6 +0.2 +0.6
nitrogen source D-Glucosamine Hydrochloride (N) -0.2 -0.1 +0.9 +0.6 +0.2
nitrogen source L-Arginine (N) -0.1 +0.3 +1.0 +0.9 -0.3
nitrogen source Gly-DL-Asp (N) -0.0 +0.2 +1.0 +0.4 +0.2
nitrogen source NAG (N) +0.1 +0.1 +1.2 +0.3 +0.2
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