Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSM_b21633 and SM_b21634 are separated by 33 nucleotidesSM_b21634 and SM_b21635 overlap by 4 nucleotidesSM_b21635 and SM_b21636 are separated by 50 nucleotidesSM_b21636 and SM_b21637 are separated by 28 nucleotides SM_b21633: SM_b21633 - enoyl-CoA hydratase, at 1,661,661 to 1,662,452 _b21633 SM_b21634: SM_b21634 - acyl-CoA thioester hydrolase, at 1,662,486 to 1,662,989 _b21634 SM_b21635: SM_b21635 - bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase, at 1,662,986 to 1,665,052 _b21635 SM_b21636: SM_b21636 - ferredoxin reductase electron transfer protein, at 1,665,103 to 1,666,179 _b21636 SM_b21637: SM_b21637 - phenylacetic acid degradation protein, at 1,666,208 to 1,666,732 _b21637
Group Condition SM_b21633 SM_b21634 SM_b21635 SM_b21636 SM_b21637
nitrogen source L-Arginine (N) -4.7 -0.1 -0.2 +0.2 N.D.
stress nitrate 40 mM -2.6 -0.7 -0.2 -0.7 N.D.
stress D-Cycloserine 0.05 mg/ml -3.1 -0.3 -0.0 -0.6 N.D.
stress copper (II) chloride 1 mM -2.2 +0.3 -0.6 -0.2 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -2.0 -0.7 +0.7 -0.7 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.4 -0.3 -0.3 -0.4 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -0.2 -0.3 -0.9 N.D.
nitrogen source L-Leucine (N) -0.6 +0.1 -0.3 -1.1 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8 -0.3 -0.0 -0.7 N.D.
stress Thallium(I) acetate 0.001 mg/ml -1.0 -0.3 -0.2 -0.3 N.D.
stress nitrite 20 mM -1.1 -0.5 +0.0 -0.1 N.D.
stress Thallium(I) acetate 0.0025 mg/ml +0.0 -0.7 -0.5 -0.4 N.D.
stress 3-octanone 2.655166667 mM -1.6 -0.0 -0.0 +0.1 N.D.
nitrogen source D-Glucosamine Hydrochloride (N) -0.9 +0.5 -0.2 -0.7 N.D.
stress 3-octanone 0.456 mM -1.5 -0.2 -0.1 +0.5 N.D.
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI -1.4 -0.1 +0.1 +0.1 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -2.0 +0.3 +0.0 +0.5 N.D.
carbon source methyl-beta-D-xylopyranoside (C) -1.7 +0.0 -0.1 +0.6 N.D.
pH LB, pH6 -0.5 -0.6 -0.3 +0.3 N.D.
nitrogen source Gelatin (N) -0.3 +0.4 -0.5 -0.6 N.D.
nitrogen source L-Asparagine (N) +0.2 +0.7 -0.1 -1.2 N.D.
stress Polymyxin B sulfate 0.00005 mg/ml +0.8 -0.1 -0.2 -0.9 N.D.
carbon source Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C) -1.1 +0.4 -0.1 +0.5 N.D.
stress Sisomicin 0.004 mg/ml +0.8 -0.2 -0.3 -0.3 N.D.
carbon source methyl 3-keto-a-D-glucopyranoside (C) -0.7 -0.1 -0.1 +0.9 N.D.
stress Cisplatin 0.001 mg/ml +0.9 -0.5 -0.2 +0.1 N.D.
stress Paraquat dichloride 0.2 mg/ml +1.3 -0.2 -0.5 +0.0 N.D.
stress Chlorite 0.1 mM +1.2 +0.3 -0.0 -0.3 N.D.
carbon source acetate (C) +1.0 +0.2 -0.2 +0.3 N.D.
carbon source L-Alanine (C) +0.9 +0.2 -0.1 +0.3 N.D.
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