Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSM_b21706 and SM_b20636 are separated by 455 nucleotidesSM_b20636 and SM_b21630 are separated by 262 nucleotidesSM_b21630 and SM_b21631 are separated by 43 nucleotidesSM_b21631 and SM_b21632 are separated by 119 nucleotides SM_b21706: SM_b21706 - LacI family transcriptional regulator, at 1,655,215 to 1,656,018 _b21706 SM_b20636: SM_b20636 - transposase of insertion sequence ISRm19 protein, at 1,656,474 to 1,657,487 _b20636 SM_b21630: SM_b21630 - hypothetical protein, at 1,657,750 to 1,658,991 _b21630 SM_b21631: SM_b21631 - carboxynorspermidine decarboxylase, at 1,659,035 to 1,660,132 _b21631 SM_b21632: SM_b21632 - 3-hydroxyacyl-CoA dehydrogenase, at 1,660,252 to 1,661,568 _b21632
Group Condition SM_b21706 SM_b20636 SM_b21630 SM_b21631 SM_b21632
carbon source Protocatechuic Acid (C) +0.0 N.D. -0.8 -0.6 -0.1
carbon source acetate (C) +0.1 N.D. -0.9 -0.9 +0.2
nitrogen source nitrate (N) -0.3 N.D. -0.2 -0.4 -0.6
carbon source acetate (C) +0.1 N.D. -0.8 -0.8 +0.2
carbon source D-Xylose (C) -0.3 N.D. -0.2 -0.3 -0.5
carbon source Fumarate (C) -0.4 N.D. -0.3 -0.3 -0.2
carbon source Myristic (C) -0.1 N.D. -0.4 -0.5 -0.3
carbon source Protocatechuic Acid (C) +0.1 N.D. -0.8 -0.6 +0.1
carbon source L-Fucose (C) -0.3 N.D. -0.2 -0.2 -0.4
nitrogen source NAG (N) +0.3 N.D. -0.5 -0.5 -0.4
carbon source L-Lysine (C) -0.3 N.D. -0.4 -0.4 +0.1
nitrogen source Gly-DL-Asp (N) -0.3 N.D. +0.0 -0.1 -0.6
carbon source Myristic (C) -0.2 N.D. -0.4 -0.4 +0.2
nitrogen source L-Leucine (N) +0.0 N.D. -0.3 +0.1 -0.5
nitrogen source L-Asparagine (N) +0.1 N.D. -0.3 +0.1 -0.6
carbon source L-Lysine (C) -0.1 N.D. -0.3 -0.4 +0.2
carbon source L-Alanine (C) +0.4 N.D. -0.4 -0.5 +0.0
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.2 N.D. +0.3 +0.4 -0.8
nitrogen source Uridine (N) +0.1 N.D. -0.1 +0.2 -0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.3 N.D. -0.2 -0.1 -0.3
nitrogen source D-Glucosamine Hydrochloride (N) +0.4 N.D. -0.2 +0.0 -0.5
carbon source Mannobiose (C) -0.3 N.D. +0.3 +0.1 -0.3
carbon source Lactitol (C) -0.3 N.D. -0.2 -0.1 +0.4
pH LB, pH6 -0.2 N.D. +0.2 +0.2 -0.3
r2a control R2A control for volatile experiments +0.2 N.D. -0.3 -0.1 +0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.0 N.D. +0.5 +0.3 -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.2 N.D. +0.3 +0.6 -0.3
pH LB, pH8 -0.1 N.D. +0.3 +0.4 +0.2
stress Sisomicin 0.004 mg/ml -0.2 N.D. +0.3 +0.7 +0.1
stress Nickel (II) chloride 1 mM -0.3 N.D. +0.3 +1.1 -0.1
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