Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSM_b21578 and SM_b21579 are separated by 59 nucleotidesSM_b21579 and SM_b21580 are separated by 46 nucleotidesSM_b21580 and SM_b21581 are separated by 264 nucleotidesSM_b21581 and SM_b21582 are separated by 95 nucleotides SM_b21578: SM_b21578 - copper-transporting P-type ATPase, at 1,116,959 to 1,119,442 _b21578 SM_b21579: SM_b21579 - MerR family transcriptional regulator, at 1,119,502 to 1,119,945 _b21579 SM_b21580: SM_b21580 - hypothetical protein, at 1,119,992 to 1,120,438 _b21580 SM_b21581: SM_b21581 - glycosyltransferase, at 1,120,703 to 1,121,794 _b21581 SM_b21582: SM_b21582 - exoD-like membrane protein, at 1,121,890 to 1,122,522 _b21582
Group Condition SM_b21578 SM_b21579 SM_b21580 SM_b21581 SM_b21582
stress Aluminum chloride -0.2 -0.0 -4.0 -0.2 -0.5
pH LB, pH8 +0.0 -0.1 -2.8 -0.1 +0.0
stress Polymyxin B sulfate 0.00005 mg/ml -0.0 -0.0 -2.9 -0.0 +0.2
carbon source D-Xylose (C) +0.1 -0.2 -2.0 +0.2 -0.1
temperature LB, 23C +0.0 -0.4 -1.2 -0.1 -0.2
r2a control R2A control for volatile experiments +0.1 -0.0 -1.5 -0.2 +0.0
carbon source D-Glucose (C) +0.0 +0.2 -1.5 -0.2 +0.0
stress D-Cycloserine 0.05 mg/ml +0.2 +0.0 -1.0 +0.0 -0.7
nutrient L-Histidine -0.2 +0.2 -0.5 -0.1 -0.7
carbon source Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C) -0.2 -0.0 -1.3 -0.0 +0.4
carbon source acetate (C) -0.3 -0.3 -1.1 +0.4 +0.3
lb LB +0.5 -0.1 -1.0 +0.0 -0.4
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI +0.2 -0.3 -1.0 -0.0 +0.2
stress Cisplatin 0.0005 mg/ml +0.2 -0.0 -0.8 +0.2 -0.5
carbon source D-Glucose (C) -0.1 +0.1 -1.2 -0.1 +0.6
pH LB, pH6 +0.5 +0.1 -1.1 -0.1 +0.2
nitrogen source Cytosine (N) -0.1 -0.5 +0.7 -0.2 -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.2 -0.3 +0.7 -0.0 -0.5
nitrogen source Uridine (N) +0.2 -0.6 +0.7 +0.1 -0.3
nitrogen source NAG (N) -0.1 -0.5 +1.7 -0.0 -0.6
stress Cisplatin 0.001 mg/ml +0.2 -0.3 +0.8 -0.4 +0.2
stress Thallium(I) acetate 0.0025 mg/ml +0.5 -0.4 +1.4 -0.1 -0.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +0.5 +0.2 -0.0 -0.6
pH LB, pH6 +0.7 +0.5 -0.9 +0.0 +0.4
nitrogen source L-Histidine (N) +0.2 -0.0 +1.1 -0.1 -0.3
carbon source Lactitol (C) -0.0 -0.4 +1.0 +0.0 +0.5
stress nitrate 40 mM +0.1 -0.1 +1.6 +0.1 -0.4
stress Paraquat dichloride 0.3 mg/ml +0.6 -0.3 +1.1 +0.3 -0.1
stress copper (II) chloride 1 mM +0.6 +0.8 +0.5 +0.1 -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.2 +0.1 +1.5 -0.0 +0.5
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