Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSM_b21505 and SM_b21506 are separated by 12 nucleotidesSM_b21506 and SM_b21507 are separated by 202 nucleotidesSM_b21507 and SM_b21508 are separated by 40 nucleotidesSM_b21508 and SM_b21509 are separated by 173 nucleotides SM_b21505: SM_b21505 - membrane protein, Wzy-like polysaccharide polymerase ExoQ, at 1,429,976 to 1,431,307 _b21505 SM_b21506: SM_b21506 - cell surface polysaccharides export protein, at 1,431,320 to 1,432,936 _b21506 SM_b21507: SM_b21507 - amino acid transporter, exporter protein, at 1,433,139 to 1,433,795 _b21507 SM_b21508: SM_b21508 - dihydrodipicolinate synthetase, at 1,433,836 to 1,434,750 _b21508 SM_b21509: SM_b21509 - plasmid stability protein, at 1,434,924 to 1,435,436 _b21509
Group Condition SM_b21505 SM_b21506 SM_b21507 SM_b21508 SM_b21509
nitrogen source L-Asparagine (N) +0.2 +0.2 +0.5 +0.1 -3.8
nitrogen source L-Glutamine (N) -0.2 -0.2 -0.2 -0.2 -0.9
nitrogen source L-Leucine (N) -0.2 +0.2 -0.5 -0.7 -0.5
stress Chlorite 0.1 mM -0.2 -0.3 -0.2 -0.3 -0.5
stress Thallium(I) acetate 0.0025 mg/ml -0.2 -0.2 -0.3 -0.2 -0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.1 -0.2 -0.4 +0.6 -1.4
lb LB -0.1 -0.2 -0.4 +0.0 -0.5
r2a-hepes control R2A-HEPES control for volatile experiments +0.1 -0.4 -0.1 -0.2 -0.6
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 +0.1 -0.2 -0.6 +0.1
nitrogen source nitrate (N) +0.1 -0.3 -0.2 +0.1 -0.7
nitrogen source L-Histidine (N) -0.0 +0.2 -0.5 +0.2 -0.8
nitrogen source D-Glucosamine Hydrochloride (N) +0.1 +0.0 -0.0 -0.3 -0.8
lb LB -0.0 -0.2 -0.3 +0.2 -0.6
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 -0.3 +0.0 +0.4 -1.3
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 +0.0 +0.3 -0.3 -0.6
nitrogen source Cytosine (N) -0.0 +0.4 -0.6 -0.3 +0.2
nitrogen source Gelatin (N) +0.0 +0.0 +0.2 +0.4 -0.9
nitrogen source L-Serine (N) -0.1 +0.2 -0.3 +0.4 -0.4
stress Polymyxin B sulfate 0.00005 mg/ml +0.1 -0.6 -0.1 +0.1 +0.4
stress Cisplatin 0.001 mg/ml -0.0 +0.0 -0.5 +0.0 +0.7
stress Paraquat dichloride 0.05 mg/ml -0.2 -0.0 -0.4 +0.4 +0.5
stress Nickel (II) chloride 1 mM -0.1 -0.4 +0.2 +0.4 +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.2 +0.1 -0.3 +0.2 +0.6
stress Aluminum chloride +0.0 -0.1 -0.4 +0.2 +0.8
carbon source D-Salicin (C) +0.1 -0.2 -0.0 -0.3 +1.1
carbon source Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C) -0.1 -0.1 +0.2 +0.1 +0.7
stress Paraquat dichloride 0.3 mg/ml +0.2 -0.2 +0.1 +0.2 +0.6
carbon source Protocatechuic Acid (C) +0.1 +0.2 -0.1 +0.1 +0.8
carbon source succinate (C) -0.0 +0.1 +0.3 +0.1 +0.7
carbon source methyl 3-keto-a-D-glucopyranoside (C) +0.1 +0.0 +0.2 +0.0 +1.0
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