Fitness for 5 genes in Sinorhizobium meliloti 1021

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 243 experiments or choose conditions or try the comparative fitness browser

500 ntSM_b21485 and SM_b21486 overlap by 32 nucleotidesSM_b21486 and SM_b21487 are separated by 299 nucleotidesSM_b21487 and SM_b21488 are separated by 37 nucleotidesSM_b21488 and SM_b21489 overlap by 4 nucleotides SM_b21485: SM_b21485 - hypothetical protein, at 1,406,242 to 1,406,682 _b21485 SM_b21486: SM_b21486 - metabolite transport protein, at 1,406,651 to 1,407,991 _b21486 SM_b21487: SM_b21487 - cytochrome o ubiquinol oxidase subunit II, at 1,408,291 to 1,409,451 _b21487 SM_b21488: SM_b21488 - cytochrome o ubiquinol oxidase subunit I, at 1,409,489 to 1,411,498 _b21488 SM_b21489: SM_b21489 - cytochrome O ubiquinol oxidase subunit III, at 1,411,495 to 1,412,127 _b21489
Group Condition SM_b21485 SM_b21486 SM_b21487 SM_b21488 SM_b21489
stress copper (II) chloride 1 mM +0.3 +0.1 -1.3 -2.0 -2.1
stress copper (II) chloride 1 mM +0.3 -0.0 -0.7 -1.4 -3.1
carbon source Protocatechuic Acid (C) +0.1 +0.0 -1.1 -0.8 -0.8
stress sodium fluoride 100 mM +0.5 +0.2 -0.7 -0.9 -1.4
stress Cisplatin 0.001 mg/ml -0.8 -0.6 +0.3 -0.4 -0.8
carbon source Protocatechuic Acid (C) +0.5 +0.1 -0.8 -0.7 -0.7
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) -2.0 -0.1 +0.2 -0.1 +0.4
stress Polymyxin B sulfate 0.00005 mg/ml -0.1 +0.0 +0.7 -0.1 -1.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.5 -0.4 +0.4 +0.5 -0.5
carbon source D-Glucosamine Hydrochloride (C) -0.3 -0.4 +0.6 +0.4 +0.3
nitrogen source Cytosine (N) +0.3 +0.4 +0.5 +0.3 -0.6
stress Cobalt chloride 0.16 mM +0.7 -0.4 +0.7 +0.3 -0.2
stress Paraquat dichloride 0.2 mg/ml +0.4 -0.0 +1.1 +0.3 -0.3
nitrogen source L-Histidine (N) +0.5 -0.2 +0.5 +0.2 +0.6
carbon source L-Histidine (C) +0.2 -0.2 +0.8 +0.4 +0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +0.3 +0.5 +0.4 -0.2
nutrient Min media with glucose -0.1 -0.2 +0.8 +0.8 +0.5
lb LB +0.2 -0.2 +0.8 +0.5 +0.5
stress Thallium(I) acetate 0.0025 mg/ml -0.3 -0.1 +0.8 +0.5 +0.9
stress Nickel (II) chloride 0.5 mM +0.4 -0.0 +0.8 +0.5 +0.2
stress Chloride 200 mM -0.3 +0.4 +0.7 +0.5 +0.7
carbon source Lactitol (C) +0.3 +0.1 +0.5 +0.4 +0.7
nutrient Min media with glucose -0.0 -0.5 +0.8 +0.7 +1.0
nutrient L-Histidine +0.6 +0.2 +0.5 +0.5 +0.4
lb LB +0.2 +0.4 +0.9 +0.6 +0.4
pH LB, pH8 -0.4 +0.6 +1.8 +0.4 +0.2
pH LB, pH8 +0.1 +0.4 +1.8 +0.7 -0.1
pH LB, pH6 -0.5 -0.0 +1.5 +1.3 +1.2
pH LB, pH6 +0.1 -0.1 +1.5 +1.3 +1.0
stress Aluminum chloride +0.2 +0.2 +1.6 +1.1 +0.7
remove
SM_b21485
plot
remove
SM_b21486
plot
remove
SM_b21487
remove
SM_b21488
plot
remove
SM_b21489
plot