Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSM_b21460 and SM_b21461 are separated by 88 nucleotidesSM_b21461 and SM_b21462 are separated by 35 nucleotidesSM_b21462 and SM_b21463 overlap by 10 nucleotidesSM_b21463 and SM_b21464 are separated by 213 nucleotides SM_b21460: SM_b21460 - sugar uptake ABC transporter ATP-binding protein, at 1,386,150 to 1,387,262 _b21460 SM_b21461: SM_b21461 - sugar uptake ABC transporter substrate-binding protein precursor, at 1,387,351 to 1,388,613 _b21461 SM_b21462: SM_b21462 - sugar kinase, at 1,388,649 to 1,389,584 _b21462 SM_b21463: SM_b21463 - glycosyl hydrolase, 6-phospho-beta-glucosidase, at 1,389,575 to 1,390,960 _b21463 SM_b21464: SM_b21464 - GntR family transcriptional regulator, at 1,391,174 to 1,391,947 _b21464
Group Condition SM_b21460 SM_b21461 SM_b21462 SM_b21463 SM_b21464
nitrogen source L-Arginine (N) -0.2 +0.0 -0.3 -0.3 -0.7
nutrient Min media with glucose -0.0 -0.2 -0.3 -0.1 -0.5
r2a-hepes control R2A-HEPES control for volatile experiments -0.1 -0.0 -0.3 -0.1 -0.5
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI -0.0 +0.1 -0.3 +0.0 -0.6
carbon source D-Glucose (C) -0.1 -0.1 -0.1 +0.1 -0.5
nitrogen source L-Histidine (N) -0.0 +0.3 -0.5 +0.1 -0.5
carbon source L-Alanine (C) +0.1 +0.1 -0.0 +0.1 -1.0
carbon source Methyl beta-D-glucopyranoside (C) -0.1 +0.0 -0.2 +0.1 -0.5
r2a-hepes control R2A-HEPES control for volatile experiments -0.2 -0.0 -0.2 +0.1 -0.3
nitrogen source L-Leucine (N) -0.0 +0.1 -0.2 -0.1 -0.6
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) -0.3 -0.0 -0.4 -0.1 +0.2
stress Polymyxin B sulfate 0.00005 mg/ml -0.2 -0.0 +0.0 +0.2 -0.5
carbon source L-Alanine (C) +0.1 +0.1 -0.2 +0.1 -0.6
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.1 +0.0 -0.3 +0.2 -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.2 -0.1 -0.2 +0.0 -0.4
nitrogen source Uridine (N) +0.1 +0.1 -0.0 +0.1 -0.7
nitrogen source Cytosine (N) -0.2 -0.0 +0.3 +0.1 -0.4
carbon source L-Histidine (C) +0.0 -0.1 +0.3 +0.2 -0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.2 +0.0 +0.1 +0.2 -0.4
stress 3-octanone 0.456 mM -0.1 +0.1 -0.2 -0.2 +0.3
carbon source Myristic (C) +0.4 +0.0 -0.0 +0.2 -0.4
r2a control R2A control for volatile experiments -0.2 +0.2 -0.3 +0.2 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 -0.0 -0.3 +0.3 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +0.1 -0.1 +0.2 -0.2
carbon source 5-Aminovaleric (C) +0.2 +0.1 +0.3 +0.1 -0.3
stress Chlorite 0.1 mM -0.2 +0.0 +0.4 +0.2 +0.2
carbon source D-Glucosamine Hydrochloride (C) +0.0 +0.1 +0.4 -0.0 +0.4
carbon source D-Maltose (C) +0.0 -0.0 +0.2 +0.0 +0.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4 +0.1 -0.2 +0.1 +0.9
nitrogen source D-Glucosamine Hydrochloride (N) +0.1 -0.0 +0.3 -0.2 +1.9
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