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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SM_b21435 and SM_b21436 are separated by 36 nucleotides
SM_b21436 and SM_b21437 overlap by 4 nucleotides
SM_b21437 and SM_b21438 are separated by 83 nucleotides
SM_b21438 and SM_b21439 are separated by 135 nucleotides
SM_b21435: SM_b21435 - allantoate amidohydrolase, at 1,365,106 to 1,366,350
_b21435
SM_b21436: SM_b21436 - C4-dicarboxylate transport system, permease large protein transmembrane, at 1,366,387 to 1,367,667
_b21436
SM_b21437: SM_b21437 - C4-dicarboxylate transport system, permease small protein transmembrane, at 1,367,664 to 1,368,140
_b21437
SM_b21438: SM_b21438 - C4-dicarboxylate transport system, C4-dicarboxylate-binding protein precursor signal peptide, at 1,368,224 to 1,369,222
_b21438
SM_b21439: SM_b21439 - translation initiation inhibitor protein, at 1,369,358 to 1,369,750
_b21439
Group
Condition
SM
_b21435
SM
_b21436
SM
_b21437
SM
_b21438
SM
_b21439
nitrogen source
Gelatin (N)
-0.2
-0.2
-0.4
-0.5
-0.7
nitrogen source
L-Leucine (N)
-0.4
-0.6
-0.6
+0.1
-0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.1
-0.2
-0.4
-0.4
-0.1
stress
Paraquat dichloride 0.2 mg/ml
-0.0
-0.4
-0.2
-0.5
+0.0
temperature
LB, 23C
+0.1
-0.4
-0.2
-0.1
-0.3
r2a control
R2A control for volatile experiments
-0.2
-0.5
-0.1
+0.2
-0.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.2
+0.0
+0.3
-0.6
-0.6
nutrient
L-Histidine
-0.2
-0.2
-0.2
-0.3
+0.2
r2a-hepes control
R2A-HEPES control for volatile experiments
+0.0
-0.5
+0.1
+0.3
-0.6
stress
Paraquat dichloride 0.3 mg/ml
-0.3
+0.2
-0.4
+0.1
-0.2
carbon source
methyl 3-keto-a-D-glucopyranoside (C)
+0.2
-0.5
+0.2
+0.2
-0.5
stress
1-octen-3-ol 0.5427293333 mM
-0.1
+0.3
-0.2
-0.2
-0.3
nitrogen source
L-Arginine (N)
-0.2
-0.5
-0.1
-0.3
+0.6
r2a control
R2A control for volatile experiments
-0.1
-0.4
+0.1
+0.4
-0.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.3
-0.9
+0.5
-0.6
+0.3
stress
nitrate 40 mM
-0.2
+0.1
-0.5
+0.3
-0.1
r2a control
R2A control for volatile experiments
-0.1
-0.3
-0.2
+0.5
-0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.0
+0.5
+0.4
-0.6
-0.4
carbon source
Protocatechuic Acid (C)
-0.1
-0.2
-0.3
+0.4
+0.1
stress
3-octanone 5.310333333 mM
+0.0
-0.5
+0.2
-0.2
+0.3
carbon source
5-Aminovaleric (C)
-0.2
+0.2
-0.5
+0.3
+0.2
nitrogen source
L-Histidine (N)
+0.2
+0.2
-0.6
+0.1
+0.1
stress
copper (II) chloride 1 mM
-0.3
-0.3
-0.1
-0.1
+0.6
stress
Thallium(I) acetate 0.001 mg/ml
-0.2
+0.1
-0.4
+0.4
+0.2
stress
Thallium(I) acetate 0.0025 mg/ml
-0.1
+0.3
-0.4
+0.2
+0.3
stress
perchlorate 10 mM
-0.1
+0.7
+0.2
-0.1
-0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.0
-0.3
+0.1
+0.2
+0.4
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.2
+0.4
+0.2
-0.5
+0.1
nitrogen source
Cytosine (N)
-0.2
+0.4
+0.2
-0.2
+0.7
stress
Polymyxin B sulfate 0.00005 mg/ml
+0.3
+0.4
+0.2
+0.9
-0.0
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