Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSM_b21313 and SM_b21314 are separated by 130 nucleotidesSM_b21314 and SM_b21315 are separated by 274 nucleotidesSM_b21315 and SM_b21316 overlap by 4 nucleotidesSM_b21316 and SM_b21317 are separated by 196 nucleotides SM_b21313: SM_b21313 - bifunctional glycosyltransferase, at 977,203 to 979,452 _b21313 SM_b21314: SM_b21314 - secreted calcium-binding protein, at 979,583 to 980,242 _b21314 SM_b21315: SM_b21315 - HlyD family protein secretion protein, at 980,517 to 981,938 _b21315 SM_b21316: SM_b21316 - ABC transporter ATP-binding protein/permease, at 981,935 to 983,704 _b21316 SM_b21317: SM_b21317 - transcriptional activator of exopolysaccharide II synthesis, MarR family protein, at 983,901 to 984,485 _b21317
Group Condition SM_b21313 SM_b21314 SM_b21315 SM_b21316 SM_b21317
stress Aluminum chloride -0.3 -0.3 -0.3 -0.2 -0.1
nitrogen source L-Leucine (N) -0.2 -0.2 -0.4 -0.2 -0.0
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -0.3 -0.1 +0.1 -0.5
nitrogen source NAG (N) -0.3 -0.4 -0.1 -0.2 +0.0
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.0 -0.6 -0.3 -0.3 +0.3
nitrogen source L-Glutamine (N) -0.4 -0.2 -0.1 -0.1 -0.1
stress Nickel (II) chloride 1 mM -0.3 +0.0 -0.1 -0.2 -0.3
nitrogen source L-Asparagine (N) -0.5 -0.4 -0.1 -0.3 +0.5
lb no stress control LB no stress control -0.1 -0.3 -0.1 -0.1 -0.2
nitrogen source D-Glucosamine Hydrochloride (N) -0.2 -0.3 -0.2 -0.1 +0.0
carbon source D-Mannitol (C) +0.0 -0.3 -0.0 +0.1 -0.6
carbon source D-Mannose (C) -0.1 -0.1 -0.1 +0.1 -0.4
carbon source D-Mannitol (C) -0.1 -0.2 -0.1 +0.1 -0.3
pH LB, pH8 -0.3 -0.3 +0.0 -0.2 +0.2
nitrogen source Gelatin (N) -0.4 -0.1 -0.1 -0.1 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.2 -0.1 +0.3 -0.1 -0.2
nitrogen source Uridine (N) -0.2 -0.2 -0.2 -0.1 +0.3
nitrogen source Cytosine (N) -0.2 +0.0 -0.1 -0.5 +0.5
nitrogen source L-Histidine (N) -0.4 -0.1 +0.2 -0.2 +0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.1 +0.1 +0.4 +0.1 -0.6
nitrogen source L-Serine (N) -0.3 +0.1 -0.0 -0.2 +0.3
carbon source methyl-beta-D-xylopyranoside (C) +0.1 -0.3 +0.0 -0.1 +0.3
stress Chlorite 0.1 mM -0.3 -0.3 -0.1 -0.1 +0.8
stress Cisplatin 0.0005 mg/ml -0.2 +0.1 +0.2 -0.3 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.1 -0.2 +0.3 -0.1 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.1 -0.4 +0.2 -0.0 +0.3
nitrogen source L-Arginine (N) +0.1 -0.0 +0.2 -0.0 +0.6
r2a control R2A control for volatile experiments +0.1 +0.4 -0.0 +0.2 +0.3
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) +0.4 +0.0 +0.3 -0.0 +0.3
stress Paraquat dichloride 0.2 mg/ml +0.1 +0.3 +0.4 +0.1 +0.3
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